L egumes (Fabaceae) are important agricultural crops, characterized by the presence of root nodules that contain symbiotic nitrogen-fixing bacteria. Fixation of atmospheric nitrogen allows reduced fertilizer costs and makes legumes a key player in crop rotation to replenish nitrogen-depleted soil. Furthermore, legumes serve as a major source of proteins and oil for human and animal nutrition. Leguminous crops with a significant economical value include oilseed crops such as soybean (Glycine max) and peanut (Arachis hypogaea), forage and soil-conditioning crops such as alfalfa (Medicago sativa) and clover (Trifolium spp.), and pulses such as beans (Phaseolus spp.), peas (Pisum spp.), and lentils (Lens spp.).The more than 19 400 leguminous species, distributed over 730 genera, produce a vast array of metabolites with diverse structures and biological activities. An important group of legume natural products are triterpene saponins, a class of secondary metabolites that display a wide range of biological activities.1 In plants they serve as allelopathic, antipalatability, anti-insect, or antifungal agents.2 Saponins also have a broad range of pharmaceutical properties, such as anti-inflammatory, antimicrobial, anticancer, or adjuvant activities.3,4 Besides saponins, isoflavonoids, alkaloids, and nonprotein amino acids commonly occur as natural products in several legume species. 1,5 As a model species for legume biology, barrel medic (Medicago truncatula), a close relative of alfalfa, is an excellent system to study secondary metabolism of legumes. 1,6 Consequently, several studies about the metabolite composition of M. truncatula have been published over the past decade. Metabolite profiling using LC-MS-based methods revealed the presence of a complex mixture of triterpene saponins in various M. truncatula tissues. 2,7À9 In accordance with other legumes from the Papilionoideae subfamily, M. truncatula is rich in isoflavonoids. 10,11 Hairy roots are generated by an infection of healthy plant tissue, not necessarily roots, with Agrobacterium rhizogenes. They are characterized by fast growth rates and do not require growth regulators for their cultivation. Furthermore, they have a high genetic stability and a high biosynthetic potential for a longer time than natural roots.12,13 Their potential to produce compounds that are also naturally occurring in wild-type roots in combination with their tolerance to cultivation in large-scale bioreactors makes hairy roots an appealing alternative for the destructive harvesting of wild-type roots, especially those of endangered plant species, to obtain valuable phytochemicals. 14,15 Hairy roots are also a valuable tool to investigate the secondary metabolism in M. truncatula. A prerequisite for the study of secondary metabolism and its application in metabolic engineering projects is the possibility to generate transgenic plant tissue. ABSTRACT: Triterpenes are one of the largest classes of plant natural products, with an enormous variety in structure and bioactivities. Here,...