The analysis of bone for radiocarbon dating is central to archaeology; however, there are other potential uses. Faunal material, tooth enamel in particular, can be reliably dated by electron spin resonance (ESR) and uranium series techniques. Analysis of amino acid content using high-pressure liquid chromatography (HPLC) provides information about collagen preservation; amino acid racemization (AAR) ages can be obtained by comparing the ratio of amino acids in original form to those that have converted to their mirror images. Ancient DNA can be extracted from bone fragments and amplified using the polymerase chain reaction, enabling determination of species. Stable carbon and nitrogen analysis of bone and teeth provides information about the diet of the animal. Analysis of strontium, oxygen and hydrogen isotopes in these tissues gives information about seasonal migrations or other movements of an animal.The success of these applications rests heavily on the preservation of the organic components, primarily collagen, and the inorganic component, apatite. This chapter begins with the methods used to detect and assess bone degradation.
Bone Diagenesis
Assessing Collagen DegradationAssessment of collagen preservation is particularly important because this type of protein is the preferred sample material for radiocarbon dating, amino acid racemization dating, and stable carbon and nitrogen isotope analysis. Studies show that microbial activity plays a major role in collagen degradation. Child et al. (1993) reported that over 200 organisms found in soil and feces could "subsist" on collagen alone; of these, 13 bacteria produce collegenase, the enzyme that breaks down collagen. Bacteria found in soil could preferentially attack either R-(or D-) aspartic acid (44 species) or S-(or L-) aspartic acid (38 species). Although the effect was not proven, these microorganisms could alter the ratio of S to R the inverse of D/L of amino acids. This finding supported the hypothesis that discrepancies between obtained and expected ages based on amino acid racemization of collagen might be due to microbial action.