The prevalence of eae-positive Escherichia coli (eaeEC) in Japan was examined using rectal stool samples taken from 35 calves less than 1 month old, 107 calves more than 1 to 3 months old, 88 heifers more than 3 to 6 months old, 214 heifers over 6 months old, and cows from 95 farms. Screening with eae PCR revealed the prevalence to be, with increasing age, 31.4, 8.4, 26.1, and 14.5%, respectively. Of 51 selected eaeEC strains, more than 40% were serotyped as O26, O103, O111, O145, or O157, which are frequently detected as enterohemorrhagic E. coli types. Four strains were identified as recently reported intimin types , , and .Enterohemorrhagic Escherichia coli (EHEC), enteropathogenic E. coli (EPEC), and attaching and effacing E. coli (AEEC) are food-borne pathogens that can cause diarrhea in humans (7,11,15). These pathogenic E. coli types often possess genes coding for Shiga toxins (stx genes) and for intimin (eae), an outer membrane protein. E. coli strains with stx genes are called Shiga toxin-producing E. coli (STEC). Cattle are considered to be the main reservoir of STEC strains, including EHEC strains (2, 3). STEC strains are classified into more than 200 O serotypes (4, 16); however, the majority of outbreaks and/or sporadic cases of hemorrhagic colitis and hemolyticuremic syndrome in humans have been caused by the members of only a few serogroups, such as O26, O111, and O157 (10,17,19). Since the strains of these limited O serogroups almost all possess eae (3, 9), this gene may be a more useful target than the stx genes for screening EHEC strains in cattle fecal samples.We used PCR to investigate the prevalence of eae-positive E. coli in cattle feces and genetically characterized the intimin types found, as well as various virulence genes seen in the isolated strains.E. coli O157:H7 strain ATCC 35150 (American Type Culture Collection, Manassas, Va.) was used as the positive control for stx 1 , stx 2 , eae, and intimin type ␥ (intimin ␥). The E. coli strains JS144, 166, VR299-2, and EPEC108, which were used as positive-control strains for intimins ␣, , and ε and bundleforming pilus (bfp), respectively, were derived from the stock culture collection of the National Institute of Animal Health, Tsukuba, Japan. A total of 444 rectal stool grab samples were collected from healthy dairy cattle (35 calves under 1 month old, 107 calves more than 1 to 3 months old, 88 heifers more than 3 to 6 months old, 214 heifers more than 6 months old, and cows) on 95 farms located in the western and central parts of Japan between May and November 2001. All rectal stool samples were sampled by veterinarians at regional governmental animal hygiene centers. The samples were placed in cool boxes (4 to 8°C) and taken to the laboratory for immediate processing (usually within 24 h). Each sample of 1 g of rectal stool was enriched in 19 ml of Trypticase soy broth (Eiken, Tokyo, Japan) at 37°C for 18 h. Ten microliters of the Trypticase soy broth culture was inoculated onto MacConkey agar (MAC; Eiken). The MAC plates were incubated...