Development of a Molecular Marker Using GWAS to Select the Resistance Resource for the Yeoncheon Strain Causing Kimchi Cabbage Clubroot Disease

Jang, Ha-Young; Park, Min Young; Lee, Jung-Soo; Kim, Changsoo; Park, Suhyoung

doi:10.12972/kjhst.20190009

HST

2019

DOI: 10.12972/kjhst.20190009

|View full text |Cite

Development of a Molecular Marker Using GWAS to Select the Resistance Resource for the Yeoncheon Strain Causing Kimchi Cabbage Clubroot Disease

Ha-Young Jang,

Min Young Park,

Jung-Soo Lee

et al.

Abstract: Resistant cultivars have been developed as a

Help me understand this report

Search citation statements

Order By: Relevance

Paper Sections

Select...

Citation Types

Supporting

Mentioning

Contrasting

Year Published

2024

Publication Types

Select...

Preprint1

Relationship

Self Cite0

Independent1

Authors

Journals

Cited by 1 publication

References 24 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

Development and application of InDels and SNPs markers based on whole-genome resequencing in Chinese cabbage

Liu,

Men,

Feng

et al. 2024

Preprint

View full text Add to dashboard Cite

Chinese cabbage (Brassica rapa L. syn. B. campestris L., AA, 2n=20) is highly popular green leafy vegetable in the triangle of U, with China serving as its primary center of origin and diversification. Plant height, rosette leaf diameter, and disease resistance have always been important selection criteria for Chinese cabbage. In this study, we conducted re-sequencing on 55 Chinese cabbage accessions collected from China, Japan and Korea, followed population genetic evolutionary analysis and genome-wide association study (GWAS). Our findings unveiled a lack of significant population structure among these accessions, implying a possible evolutionary link or hybridization between Japanese and Korean Chinese cabbages with their Chinese counterparts. GWAS analysis results revealed that BrASD1, BrZHD13, BrGH3.3, and BrGH3.6 regarded as potential candidate genes highly associated with plant height in Chinese cabbage. Moreover, we also identified two single nucleotide polymorphisms (SNPs) loci associated with rosette leaf diameter and one SNP locus associated with downy mildew resistance, respectively. Furthermore, a novel tightly linked Insertion-deletion (InDel) marker on the end of A04 chromosome in B. rapa, SMB.4, has been developed. And SMB.4 can potentially serve as a useful molecular marker screening the genetic resources with downy mildew resistance and application for the downy mildew resistance breeding of Brassica crops.

show abstract

Development and application of InDels and SNPs markers based on whole-genome resequencing in Chinese cabbage

Liu,

Men,

Feng

et al. 2024

Preprint

View full text Add to dashboard Cite

show abstract

scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.

Contact Info

customersupport@researchsolutions.com

10624 S. Eastern Ave., Ste. A-614

Henderson, NV 89052, USA

This site is protected by reCAPTCHA and the Google Privacy Policy and Terms of Service apply.

Blog Terms and Conditions API Terms Privacy Policy Contact Cookie Preferences Do Not Sell or Share My Personal Information

Made with 💙 for researchers

Part of the Research Solutions Family.

Development of a Molecular Marker Using GWAS to Select the Resistance Resource for the Yeoncheon Strain Causing Kimchi Cabbage Clubroot Disease

Abstract: Resistant cultivars have been developed as a

Cited by 1 publication

References 24 publications

Development and application of InDels and SNPs markers based on whole-genome resequencing in Chinese cabbage

Development and application of InDels and SNPs markers based on whole-genome resequencing in Chinese cabbage

Contact Info

Product

Resources

About