“…Determination of sequence variations in the hyper-variable 18S rDNA cistron can discriminate between haemoprotozoan parasites (Gubbels et al , 1999) and overcome limitations of traditional gross parasitological methods for the diagnosis of haemoprotozoa at species level (Agudelo et al , 2013; Haanshuus et al , 2013; Lee et al , 2015; Lefterova et al , 2015; Mens et al , 2006; Rougemont et al , 2004; Steenkeste et al , 2009). Various PCR methods (reverse line blot (RLB)-PCR, quantitative (q)PCR, multiple PCR) have been described to amplify the 18S region for sequence determination, but these are low throughput, hence relatively expensive, and can be error-prone (Bilgic et al , 2013; Chaisi et al , 2013; Gubbels et al , 1999; Kundave et al , 2018). These methods depend on the use of species-specific primers and probes, hence can only identify the tested species.…”