Deviation age of a deep-sea demersal fish, Bothrocara hollandi, between the Japan Sea and the Okhotsk Sea

Kodama, Yasumi; Yanagimoto, Takashi; Shinohara, Gento; Hayashi, Ikuo; Kojima, Soichi

doi:10.1016/j.ympev.2008.08.022

Cited by 21 publications

(31 citation statements)

References 16 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Primers Pro-L (5′-CTACCTCCAACTCCCAAAGC-3′) (Palumbi et al 1991) and either 1612SAR-H (5′-ATAGTGGGGTATC-TAATCCCAGTT-3′) (Palumbi et al 1991) or KareiCR-1R (5′-AAAGAGAACCCCTTACCCGC-3′) were used for H. dubius. Primers ZThr-L (5′-AGAGCGCCGGTCTTGTA-ARCCG-3′) (Kodama et al 2008) and either 1612SAR-H or KareiCR-1R were used for H. pinetorum. The primer KareiCR-1R was synthesized on the basis of determined sequences.…”

Section: Methodsmentioning

confidence: 99%

“…As a result, the deep-sea fauna was thought to have become extinct and was replaced by the present fauna, established by recolonization from adjacent habitats after the LGM (Oba et al 1991). However, recent phylogeographical studies of deep-sea demersal fish (Kodama et al 2008, Kodama & Kojima 2009, Kojima et al 2011) and snails (Iguchi et al 2007) suggest that some species survived in the oxic habitats which remained in restricted parts of the Sea of Japan during the LGM (Gorbarenko et al 2004, Itaki et al 2004. The existence of a few endemic deep-sea species in the Sea of Japan, such as the deep-sea whelks Buccinum tsubai and B. striatissimum (Amano 2004), the eelpouts Lycodes japonicus and L. teraoi (Nakabo 2013), and the snailfish Careproctus notosaikaiensis (Kai et al 2011b), suggests that long-term geographical isolation of these Sea of Japan populations has continued.…”

Section: Introductionmentioning

confidence: 99%

“…Based on nucleotide sequences of the mitochondrial control region, a large genetic deviation between populations in the Sea of Japan and in neighboring seas was shown for the Japan-sea eelpout Bothrocara hollandi, which is the dominant deep-sea demersal fish in the Sea of Japan (Kodama et al 2008, Kojima et al 2011. Extremely low dispersal ability without ontogenetic vertical migration of this species is thought to have resulted in long-term geographical isolation of the Sea of Japan from neighboring sea areas (Kodama et al 2008).…”

Section: Introductionmentioning

confidence: 99%

“…Extremely low dispersal ability without ontogenetic vertical migration of this species is thought to have resulted in long-term geographical isolation of the Sea of Japan from neighboring sea areas (Kodama et al 2008). This pattern corresponds to phylogeographic category I of Avise (2000).…”

Section: Introductionmentioning

confidence: 99%

See 3 more Smart Citations

Contrasting genetic population structures between congeneric flounder species, Hippoglossoides dubius and H. pinetorum

Kojima

Sakuma

Yanagimoto

2014

Plankton Benthos Res

Self Cite

View full text Add to dashboard Cite

Abstract:The Sea of Japan is a semi-closed marginal sea where genetic break and/or speciation have been reported for some deep-sea taxa. Population structure was compared between the congeneric deep-sea flounder species Hippoglossoides dubius and H. pinetorum inhabiting the Sea of Japan and neighboring seas. Based on nucleotide sequences of mitochondrial control regions, the H. dubius population was concluded to be genetically homogeneous, while 2 genetically distinct groups were recognized among H. pinetorum. Although the rare group of H. pinetorum populates the Sea of Japan, the Yellow Sea, the Okhotsk Sea, and the northwestern Pacific, frequency was the highest in the Sea of Japan. The unique phylogeographic pattern of H. pinetorum may be attributable to secondary contact with the Sea of Japan lineage, which was isolated from other sea areas during the last glacial period. A difference in bathymetrical distribution between the two species might explain their contrasting genetic population structures.

show abstract

Section: Methodsmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

Section: Introductionmentioning

confidence: 99%

See 2 more Smart Citations

Contrasting genetic population structures between congeneric flounder species, Hippoglossoides dubius and H. pinetorum

Kojima

Sakuma

Yanagimoto

2014

Plankton Benthos Res

Self Cite

View full text Add to dashboard Cite

show abstract

“…It has been postulated that the surface water became brackish due to the input of freshwater from the continent (Oba et al 1991), and anoxic bottom water conditions prevailed during the glacial sea level lowstands (Tada 1994, Tada & Irino 1999. Such environmental changes could have caused the fragmentation and reduction of marine organism populations (Kodama et al 2008, Kodama & Kojima 2009, Kojima et al 2001, 2004.…”

Section: Introductionmentioning

confidence: 99%

A review of genetic intra- and interspecific relationships of deep-sea Buccinum and Neptunea species around Japan (with special reference to the Sea of Japan)

Iguchi

2010

Plankton Benthos Res

View full text Add to dashboard Cite

Abstract:The Sea of Japan is a marginal sea surrounded by narrow, shallow straits which became isolated from neighboring waters when the sea level fell during the Pleistocene glacial periods. In order to understand the influences of such paleoenvironmental changes on the formation of populations of marine organisms in the Sea of Japan, deep-sea whelks (genera Buccinum and Neptunea (Buccinidae)) are appropriate materials considering their low dispersal abilities through direct development. Deep-sea whelks are also important marine species for fisheries in the Sea of Japan. However, several taxonomical problems due to morphological variations and lack of knowledge about gene flows among local populations in deep-sea whelks may lead to inappropriate fisheries management. We and my collaborators examined the genetic inter-and intraspecific relationships of deep-sea Buccinum and Neptunea species by means of molecular markers with samples from various stations around Japan (mainly from the Sea of Japan). We found some intriguing genetic structures closely related to their characteristic reproductive mode and paleoenvironmental changes in the Sea of Japan. In addition, by comparing inter-and intraspecies relationships of some Buccinum species, I clarified some novel taxonomical aspects of these species. Here, I review these genetic structures of deep-sea whelks and describe the future direction of phylogeographical approaches to deep-sea organisms in the Sea of Japan.

show abstract

Bibliography

2016

Fishes of the World

View full text Add to dashboard Cite

Deviation age of a deep-sea demersal fish, Bothrocara hollandi, between the Japan Sea and the Okhotsk Sea

Cited by 21 publications

References 16 publications

Contrasting genetic population structures between congeneric flounder species, Hippoglossoides dubius and H. pinetorum

Contrasting genetic population structures between congeneric flounder species, Hippoglossoides dubius and H. pinetorum

A review of genetic intra- and interspecific relationships of deep-sea Buccinum and Neptunea species around Japan (with special reference to the Sea of Japan)

Bibliography

Contact Info

Product

Resources

About