Fish may influence habitat selection and reproductive success in waterfowl. We investigated the effects of common carp Cyprinus carpio on breeding coots Fulica atra along a gradient of fish size structure and density, created by separate stocking of age cohorts in ponds in eastern Poland. Coot breeding densities were higher on ponds with low biomass of small-sized, young-of-the-year fish than on ponds with medium-or large-sized fish, stocked at high biomass densities; they also increased with increasing submerged vegetation biomass (an effect correlated with water transparency) and emergent vegetation cover. Densities of nektonic and epibenthic macroinvertebrates and of amphibian larvae were also negatively influenced by fish size/density gradient, while densities of emerging insects were not affected. However, coot breeding success per pair was similar among pond types, while positively related to submerged vegetation, indicating that either plant food abundance was more important than the overall trophic impact of fish or fledgling production was additionally limited by factors other than food. Carp may adversely affect pond habitats of waterfowl both via trophic interactions and through abiotic disturbance of ecosystem processes. In coots, however, the effects can be mitigated by maintenance of abundant emergent vegetation and of submerged macrophytes resistant to fish.