Keywords: computational biology, intracellular trafficking, intraflagellar transport, ciliogenesis, mathematical modeling, microtubule, neuron, presteady-state kinetics, ATPase, processivity
ABSTRACTHeterodimeric KIF3AC and KIF3AB, two members of the mammalian kinesin-2 family, generate force for microtubule plus end-directed cargo transport. However, the advantage of heterodimeric kinesins over homodimeric ones is not well understood. We showed previously that microtubule association for entry into a processive run was similar in rate for KIF3AC and KIF3AB at ~7.0 µM -1 s -1 . Yet, for engineered homodimers of KIF3AA and KIF3BB, this constant is significantly faster at 11 µM -1 s -1 and much slower for KIF3CC at 2.1 µM -1 s -1. These results led us to hypothesize that heterodimerization of KIF3A with KIF3C and KIF3A with KIF3B altered the intrinsic catalytic properties of each motor domain. Here, we tested this hypothesis by using presteady-state stoppedflow kinetics and mathematical modeling. Surprisingly, the modeling revealed that the catalytic properties of KIF3A and KIF3B/C were altered upon microtubule binding, yet each motor domain retained its relative intrinsic kinetics for ADP release and subsequent ATP binding and the nucleotide-promoted transitions thereafter. These results are consistent with the interpretation that for KIF3AB, each motor head is catalytically similar and therefore each step is approximately equivalent. In contrast, for KIF3AC the results predict that the processive steps will alternate between a fast step for KIF3A followed by a slow step for KIF3C resulting in asymmetric stepping during a processive run. This study reveals the impact of heterodimerization of the motor polypeptides for microtubule association to start the processive run and the fundamental differences in the motile properties of KIF3C in comparison to KIF3A and KIF3B.Kinesin-2 is a unique family of processive kinesins because it contains both homodimeric and heterodimeric motors involved in microtubule plusend directed cargo transport (reviewed in (1-4)). The mammalian heterodimeric kinesins result from three gene products: KIF3A, KIF3B, and KIF3C to form heterodimeric . KIF3AB and its orthologs form a heterotrimeric complex by association with KAP, a distinctive http://www.jbc.org/cgi/doi/10.1074/jbc.RA118.002767 The latest version is at JBC Papers in Press. Published on July 10, 2018 as Manuscript RA118.002767 by guest on April 27, 2019 http://www.jbc.org/ Downloaded from 2 adaptor protein for cargo linkage because it is largely composed of armadillo repeats (10)(11)(12)(13)(14)(15). It is the armadillo repeats that provide specificity of the interaction between KIF3AB and KAP and between KIF3AB-KAP and its cargo. KIF3AB-KAP transports multimeric protein complexes (designated intraflagellar transport (IFT) particles) into the cilium and has also been linked to ciliadependent signal transduction pathways including the Hedgehog signaling pathway (16,17). Moreover, KIF3A, KIF3B, and KAP are all essential genes (18)...