The kinetics of xanthine oxidase has been investigated with the aim of addressing several outstanding questions concerning the reaction mechanism of the enzyme. Steady-state and rapid kinetic studies with the substrate 2,5-dihydroxybenzaldehyde demonstrated that (k cat /K m ) app and k red /K d exhibit comparable bellshaped pH dependence with pK a values of 6.4 ؎ 0.2 and 8.4 ؎ 0.2, with the lower pK a assigned to an active-site residue of xanthine oxidase (possibly Glu-1261, by analogy to Glu-869 in the crystallographically known aldehyde oxidase from Desulfovibrio gigas) and the higher pK a to substrate. Early steps in the catalytic sequence have been investigated by following the reaction of the oxidized enzyme with a second aldehyde substrate, 2-aminopteridine-6-aldehyde. The absence of a well defined acid limb in this pH profile and other data indicate that this complex represents an E ox ⅐S rather than E red ⅐P complex (i.e. no chemistry requiring the active-site base has taken place in forming the long wavelengthabsorbing complex seen with this substrate). It appears that xanthine oxidase (and by inference, the closely related aldehyde oxidases) hydroxylates both aromatic heterocycles and aldehydes by a mechanism involving base-assisted catalysis. Single-turnover experiments following incorporation of 17 O into the molybdenum center of the enzyme demonstrated that a single oxygen atom is incorporated at a site that gives rise to strong hyperfine coupling to the unpaired electron spin of the metal in the Mo V oxidation state. By analogy to the hyperfine interactions seen in a homologous series of molybdenum model compounds, we conclude that this strongly coupled, catalytically labile site represents a metalcoordinated hydroxide rather than the Mo؍O group and that this Mo-OH represents the oxygen that is incorporated into product in the course of catalysis.Xanthine oxidase from cow's milk is a homodimer with a molecular mass of 300 kDa, with each catalytically independent subunit possessing four prosthetic groups: one molybdenum center, one FAD, and two Fe 2 S 2 (Cys) 4 iron-sulfur centers. Physiologically, the enzyme catalyzes the oxidative hydroxylation of hypoxanthine to xanthine and the subsequent hydroxylation of xanthine to uric acid, the final two steps of purine metabolism in mammals. Substrate hydroxylation takes place at the molybdenum center of the enzyme, which becomes reduced from Mo VI to Mo IV in the process (1). The reducing equivalents introduced at the molybdenum center are subsequently passed via intramolecular electron transfer to the flavin center, where reaction with O 2 takes place to give peroxide or superoxide, depending on the level of enzyme reduction (2, 3).Xanthine oxidase exhibits an unusually broad specificity toward reducing substrates. It can hydroxylate a wide variety of purines, pteridines, and related aromatic heterocycles and also a range of both aliphatic and aromatic aldehydes, taking these to the corresponding carboxylic acid. Indeed, xanthine oxidase belongs to the ...