One powerful technique that has not been exploited for studying LacY is f luorescence resonance energy transfer (FRET) (13). This sensitive spectroscopic technique yields information regarding inter-and intramolecular distances. Essentially the method analyzes how the lifetime and quantum yield of a fluorescent molecule (the donor) is influenced by another fluorescent molecule (the acceptor) and vice versa. By using Förster theory, which states that the efficiency of energy transfer is inversely proportional to the sixth power of distance, distances between two fluorophors can be measured (14). The sensitivity and range of distances that can be calculated reliably from FRET depends on the spectral characteristics of the dyes and their relative orientations, which together determine R 0 , the distance at which energy transfer efficiency is 50%. The technique is typically most sensitive for distances between 20 and 100 Å (14, 15).Luminescence resonance energy transfer (LRET) is a particular type of FRET where a lanthanide atom (Tb 3ϩ or Eu 3ϩ ) transfers energy to an organic fluorescent acceptor. The technique exploits the remarkable luminescence properties of lanthanides (i.e., millisecond to submillisecond lifetimes, narrow and multiple emission bands in the visible spectrum, and unpolarized emission). As a consequence, lanthanide luminescence overcomes some of the limitations of conventional FRET experiments [e.g., the unpolarized long lifetime allows random orientation of both the donor and acceptor during the energy transfer process, thereby simplifying determination of the orientation factor between donor and acceptor ( 2 )] (14).Current LRET studies use a thiol-reactive chelator to bind a Tb 3ϩ ion at an engineered Cys residue in the protein (16)(17)(18)(19)(20). The chelator binds Tb 3ϩ with high affinity, shielding the cation from nonradiation deexcitation processes (primarily solvent quenching) (19,21). The resulting Tb 3ϩ emission has a high quantum yield, sometimes approaching unity, and a long lifetime. Although these long-lived lanthanide chelates have been used successfully for estimating inter-and intramolecular distances in the range of 45 Å or more (16-20), they are problematic for short distance measurements in the range desired for most intramolecular interactions because: (i) reactive and highly luminescent chelates are not usually available commercially and require synthesis (21); (ii) the bulk of the chelator may perturb the local environment of the protein; (iii) the mobility inherent in the use of a bulky group with a linker makes distance calculations less precise, particularly under 40 Å; and (iv) both the chelator and the fluorophor are usually directed toward Cys residues, sample heterogeneity is introduced.An alternative possibility for binding Tb 3ϩ at a defined position within a protein is to introduce an EF-hand motif, which Abbreviations: LacY, lactose permease; FRET, fluorescence resonance energy transfer; R0, the distance at which energy transfer efficiency is 50%; LRET, lumines...