Boronic acids are
widely used for labeling catechols and carbohydrates
in analytical (bio)chemistry due to their high binding affinities
for diols. Here, we present two asymmetrically substituted Bodipy
dyes with a boronic acid at the β-position (BBB). We present
a green-emitting BBB, gBBB, and, by expanding the conjugated system
of the Bodipy core at α-position, a red-emitting rBBB. Especially,
gBBB shows a bathochromic shift of the electronic spectra upon binding
to saccharides and polyols, whereas the fluorescence lifetime of rBBB
is more sensitive to hydroxy-ligand binding. Moreover, gBBB constantly
shows higher binding affinities than rBBB, reaching K
b ≈ 103 M–1 at pH
8.5 for fructose. Finally, time-resolved fluorescence anisotropy allows
to distinguish the number of saccharide units of oligosaccharides
as the bond along the transition dipole moment ensures that the fluorescence
anisotropy only decays due to the rotational diffusion of labeled
carbohydrates. β-substituted BODIPY dyes are, thus, foreseen
as fluorescence anisotropy labels for macromolecule sizing, where
conventional fluorophores fail to discriminate due to the chemical
similarity of recognition sites.