A quantitative TaqMan PCR method was developed for assessing the Cryptosporidium parvum infection of in vitro cultivated human ileocecal adenocarcinoma (HCT-8) cell cultures. This method, termed cell culture quantitative sequence detection (CC-QSD), has numerous applications, several of which are presented. CC-QSD was used to investigate parasite infection in cell culture over time, the effects of oocyst treatment on infectivity and infectivity assessment of different C. parvum isolates. CC-QSD revealed that cell culture infection at 24 and 48 h postinoculation was approximately 20 and 60%, respectively, of the endpoint 72-h postinoculation infection. Evaluation of three different lots of C. parvum Iowa isolate oocysts revealed that the mean infection of 0.1 N HCl-treated oocysts was only 36% of the infection obtained with oocysts treated with acidified Hanks' balanced salt solution containing 1% trypsin. CC-QSD comparison of the C. parvum Iowa and TAMU isolates revealed significantly higher levels of infection for the TAMU isolate, which agrees with and supports previous human, animal, and cell culture studies. CC-QSD has the potential to aid in the optimization of Cryptosporidium cell culture methods and facilitate quantitative evaluation of cell culture infectivity experiments.Ongoing challenges for the water industry are Cryptosporidium detection and infectivity determination. Mouse models have frequently been used to determine the infectivity of Cryptosporidium oocysts (2,10,18,20). However, animal infectivity determination is costly and labor-intensive and requires as long as 2 weeks to complete. Furthermore, it is not feasible for the analysis of environmental samples. In an attempt to simplify infectivity determination, several in vitro methods have been developed, such as in vitro excystation and microscopic assays evaluating the uptake or exclusion of fluorogenic dyes (3, 4) and fluorescence in situ hybridization techniques (35). Various PCR strategies have also been developed to assess the viability of Cryptosporidium parvum oocysts, including the integration of in vitro excystation (5, 9, 36) and the use of reverse transcription-PCR for the detection of mRNA transcripts found only in viable oocysts (24,30).Strategies using in vitro cell culture of C. parvum are attractive alternatives to animal infectivity testing. In most of these assays, oocysts are stimulated to excyst by exposure to sodium hypochlorite (bleach), bile enzymes, and/or acidic pH (7,23,24,32) and are then inoculated onto in vitro-cultivated cell culture monolayers. Sporozoites released from oocysts invade and replicate within the intracellular environment of the cells. After incubation, parasites are detected within the cell cultures by a variety of techniques, including immunofluorescence microscopy (28), reverse transcription-PCR (24), and standard PCR (7). Quantification of cell culture infection for pharmaceutical and disinfection studies has been achieved with an enzyme-linked immunosorbent assay (38). Most-probablenumber format...