Eisenia bicyclis is a dominant stipitate understory canopy-forming kelp on the Pacific coast of Japan. It is perennial and individuals live for approximately 8 years. While the blades of E. bicyclis are gradually renewed, the stipes are constantly present to support the blades and have been observed to persist for some time after the loss of blades or detachment of the holdfast. Therefore, the stipe may function as a long-lasting carbon sink. However, there have been few attempts to quantify the carbon contribution of stipes to the coastal environment. In this study, field experiments were conducted to investigate the contribution of stipes to carbon storage. Pieces of stipe (N = 6) ca 8 cm long were cut from E. bicyclis thalli and suspended at a depth of 3 m in a sheltered, subtidal rocky shore environment at Kitsunezaki, Oshika Peninsula, Japan. Changes in the morphology, wet weight and carbon content of these stipes were recorded for two-month periods at about two-week intervals. The experiments were conducted at three different times of the year: Experiment I was conducted in Jun-Aug, 2021, at 20–30ºC; Experiment II during Sep-Dec, 2021, at 13–22ºC; and Experiment III during Apr-Jun, 2022 at 8–18ºC. The results were compared and analyzed for any apparent seasonal differences. Stipe thinning began in the central region, as demonstrated by decreasing stipe weight, at a rate of 1.59% day− 1 (Expt. I), 1.59% day− 1 (Expt. II) and 0.13% day− 1 (Expt. III). Carbon content was similar whatever the season and almost constant. Nitrogen content was 50% higher in blades than in stipes. It is concluded that E. bicyclis stipes contribute to the coastal ecosystem by providing a long-lasting carbon sink. Accelerated decomposition of kelp stipes with increasing temperature suggests that global warming may reduce their value as an important coastal carbon sink.