Impaired chloroplast function is responsible for nearly two-thirds of the inhibition to net photosynthesis caused by dark chilling in tomato (Lycopersicon esculentum Mill.), yet it has not been possible to localize the dysfunction to specific chloroplast reactions. We report here on an effect that low-temperature exposure has in tomato on the expression of certain nuclear-encoded chloroplast proteins, which may be directly related to the chilling sensitivity of photosynthesis. Transcriptional activity of genes for both the chlorophyll a/b binding protein of photosystem H (Cab) as well as for ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) activase was found to be controlled by an endogenous rhythm. For Cab this rhythm was also visible at the level of newly synthesized protein, indicating that the circadian control of transcriptional activity normally ensures that this protein is synthesized only during daylight hours. However, low-temperature treatment suspended the timing of the rhythm in tomato so that, upon rewarming, the circadian control was reestablished but was displaced from the actual time of day by the length of the chilling exposure. In addition, we found that the normal turnover of Cab and Rubisco activase mRNA was suspended during the low-temperature treatment, but, upon rewarming, this stabilized message was not translated into protein. We believe that the low-temperature-induced mistiming of gene expression together with its effect on the translatability of existing transcripts may be an important clue in unraveling the basis for the chilling sensitivity of photosynthesis in tomato.Many plant species that are evolutionarily adapted to warm habitats are very susceptible to injury by low-temperature exposure. Brief exposures to low (00C < T < 10TC), but above freezing, temperatures can have profound effects on seasonlong growth and productivity even though there may be no outward signs of damage. For many chill-sensitive species, an important element of the low temperature-induced injury is an inhibition of photosynthesis.Low-temperature exposure in combination with high irradiance causes rapid inhibition of photosynthesis in a broad range of plants including tomato (1), cucumber (2), and maize (3). Several elements contributing to the inhibition have been identified. Damage to the reducing side of photosystem II is well documented (4-6) and, for moderately sensitive species such as maize, may be the major cause of impaired whole plant photosynthesis following chilling. However, in the most chill-sensitive species, such as tomato (Lycopersicon esculentum), impaired reductive activation of the stromal bisphosphatases appears to be the dominating factor limiting carbon assimilation following chilling in the light (7).Low temperature at night can also cause severe reductions in CO2 fixation on the day following the chill. Like the inhibition caused by chilling in the light, it is clear that the primary loss of activity arises due to direct impairment of chloroplast function (8), but i...