In this paper, to address problems in multichannel music signal separation, we propose a new hybrid method that combines directional clustering and advanced nonnegative matrix factorization (NMF). The aims of multichannel music signal separation technology is to extract a specific target signal from observed multichannel signals that contain multiple instrumental sounds. In previous studies, various methods using NMF have been proposed, but many problems remain including poor separation accuracy and lack of robustness. To solve these problems, we propose a new supervised NMF (SNMF) with spectrogram restoration and a hybrid method that concatenates the proposed SNMF after directional clustering. Via the extrapolation of supervised spectral bases, the proposed SNMF attempts both target signal separation and reconstruction of the lost target components, which are generated by preceding directional clustering. In addition, we experimentally reveal the trade-off between separation and extrapolation abilities and propose a new scheme for adaptive divergence, where the optimal divergence can be automatically changed in each time frame according to the local spatial conditions. The results of an evaluation experiment show that our proposed hybrid method outperforms the conventional music signal separation methods.Index Terms-Multichannel signal separation, music signal processing, nonnegative matrix factorization (NMF), spectrogram restoration.