2019
DOI: 10.1016/j.chemosphere.2019.06.034
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Diverse expression regulation of Hsp70 genes in scallops after exposure to toxic Alexandrium dinoflagellates

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Cited by 37 publications
(36 citation statements)
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“…The RNA-seq sequences were aligned to the genome with Tophat (ver2.0.9). Expression of all C1Q genes was normalized and represented in the form of RPKM (Reads Per Kilobase of exon model per Million mapped reads) based on R software, following the formula total exon reads/mapped reads (millions)/exon length (Kb) (Hu et al, 2019). RPKM of the C1Q genes obtained from RNA-seq data were used to analyze their expression profile in kidney and hepatopancreas with different toxic dinoflagellates diets.…”
Section: Feeding the Scallops With Two Different Toxic Dinoflagellates: A Minutum And A Catenellamentioning
confidence: 99%
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“…The RNA-seq sequences were aligned to the genome with Tophat (ver2.0.9). Expression of all C1Q genes was normalized and represented in the form of RPKM (Reads Per Kilobase of exon model per Million mapped reads) based on R software, following the formula total exon reads/mapped reads (millions)/exon length (Kb) (Hu et al, 2019). RPKM of the C1Q genes obtained from RNA-seq data were used to analyze their expression profile in kidney and hepatopancreas with different toxic dinoflagellates diets.…”
Section: Feeding the Scallops With Two Different Toxic Dinoflagellates: A Minutum And A Catenellamentioning
confidence: 99%
“…To explore these C1Qs' involvement during PSTs accumulation, we chose two major strains of the PST-producer Alexandrium (A. catenella and A. minutum) to feed the scallops. In C. farreri, hepatopancreas and kidney are the main repository of PSTs during uptake and depuration, and dynamic PST metabolites were detected, contributing to PSTs detoxification (Hu et al, 2019;Lou et al, 2020). We systematically assessed the CfC1Q responses in hepatopancreas and kidney after feeding with toxic A. catenella and A. minutum, revealing the variable regulation of scallop C1Qs between organs and between different toxic microalgae species.…”
Section: Introductionmentioning
confidence: 99%
“…All experiments on scallops were conducted following institutional and national guidelines. The expression profiles of SOD genes in scallop developmental stages and adult organs/tissues were analyzed based on the RNA-seq data [25,66]. Briefly, embryos/larvae and adults of C. farreri were collected from the hatchery of Xunshan Group Co., Ltd. (Shandong, China).…”
Section: Expression Profiles Of Sod Genes During C Farreri Developmementioning
confidence: 99%
“…Previously, adult C. farreri was challenged with the PST-producing dinoflagellates A. minutum (strain AM-1) and A. catenella (strain ACDH) via feeding prior to sample collection [66]. No other noxious metabolites were previously reported in these two strains, but the main PST analogs in AM-1 and ACDH were gonyautoxins (GTX1-4) and N-sulfocarbamoyl-gonyautoxins (C-1,2), respectively [25,66,67].…”
Section: Expression Response Of Sod Genes To a Minutum And A Catenementioning
confidence: 99%
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