In a parasitological survey of fishes from Moreton Bay (southeastern Queensland, Australia), 169 teleost fishes, representing 54 species from 28 families, were examined for larval cestodes. Of these 54 species, 36 were found to be infected by metacestodes. Metacestodes were characterised by morphological and molecular data (the D1-D3 region of the 28S rDNA gene); these data were analysed in parallel to inform larval type allocation. Metacestodes collected represented eight morphological types, seven previously reported (Types I, II, IV, V, VI, VII, and X) and one novel type (Type XVI). Phylogenetic analyses were conducted to genetically match larval types to adult cestodes. Six of the eight larval types found were matched to adult forms: Type I metacestodes matched species of Phoreiobothrium Linton, 1889 (Onchobothriidae); Type II metacestodes matched species of Acanthobothrium van Beneden, 1849 (Onchobothriidae); Type IV metacestodes matched species of Scyphophyllidium Woodland, 1927 and Alexandercestus Ruhnke & Workman, 2013 (Phyllobothriidae); Type VI metacestodes matched species of Anthobothrium van Beneden, 1850 (Tetraphyllidea incertae sedis); Type X metacestodes matched species of Ambitalveolus Caira & Jensen, 2022 (Tetraphyllidea incertae sedis); and Type XVI metacestodes matched species of Platybothrium Linton, 1890 (Onchobothriidae). Based on phylogenetic topology, Type V metacestodes are inferred to match Pedibothrium Linton, 1909 (Balanobothriidae) and Type VII metacestodes are inferred to match Spongiobothrium Linton, 1889 (Rhinebothriidae). These findings support and extend the unified morphological type system proposed previously, but suggest that morphological types will ultimately be informative to identify metacestodes to a group of related genera rather than any distinct genus.