DNA barcoding of the fishes of the genus
            <i>Alburnoides</i>
            (Actinopterygii, Cyprinidae) from Caucasus

Левин, Б. А.; Simonov, Evgeniy; Matveyev, Michael P.; Artaev, Oleg; Mustafayev, N. J.; Pashkov, Andrey N.; Roubenyan, Haikaz R.

doi:10.1080/24701394.2016.1238900

Cited by 25 publications

(9 citation statements)

References 42 publications

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“…Phylogenetic analyses of the COI gene sequences of the 17 Alburnoides species show a divergence into European and Ponto‐Caspian clades, concordant with previous studies (Levin et al., 2018, 2019; Stierandová et al., 2016) (Figure 3). All specimens of Alburnoides sp.…”

Section: Resultssupporting

confidence: 90%

“…The K2P distance between individuals from Uzbekistan and Tajikistan are from 0.00% to 0.35% (Table 2). Confirming morphological studies by Bogutskaya and Coad (2009), the K2P genetic distance (0.0678 ± 0.0016) between Alburnoides species from the Central Asia and A. eichwaldii based on COI markers is consistent with species‐level divergences in other Alburnoides species (Jouladeh Roudbar et al., 2016; Levin et al, 2018). The most closely related species to A. holciki is A. kubanicus from the Azov‐Black Sea basin with low support (K2P distance is 0.0558 ± 0.0018) (Figure 3).…”

Section: Resultssupporting

confidence: 76%

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DNA barcoding revealed a wider distribution of Alburnoides holciki (Teleostei: Leuciscidae) in the inland waters of Uzbekistan

2021

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The genus Alburnoides Jeitteles, 1861, a member of the family Leuciscidae, is distinguished from the nearest genus Alburnus Rafinesque, 1820 by having small black spots which are located on each side of the lateral line canal pore outlining the canal at least along its front portion while a dark strip reaches from behind the eye to the caudal fin (Bogutskaya & Coad, 2009). Members of Alburnoides are widespread in Eurasian waters with 35 valid species described so far (Fricke et al., 2020). Two species of Alburnoides, the Tashkent riffle bleak A. oblongus Bulgakov, 1923 and the Ashkhabad spirlin A. varentsovi Bogutskaya & Coad, 2009 were discovered in the Central Asian water basin, while the remaining Alburnoides populations of the Aral Sea basin were recognized as A. eichwaldii (Berg, 1949;Nikolski, 1938). According to the recent molecular studies, Alburnoides oblongus, occurred in the Syr Darya basin in Kazakhstan and Uzbekistan, has been revealed to belong to the genus Alburnus (Matveyev at al., 2017). The last revision of Alburnoides from the Caucasus and Central Asia (Bogutskaya & Coad, 2009) revealed that A. eichwaldii is restricted to Transcaucasia, and members of the genus Alburnoides in Central Asian waters belong to different species. Another recent study (Levin et al., 2019) showed that Alburnoides eichwaldii in Central Asia should be classified as Alburnoides holciki from various rivers in Tajikistan using both morphological and molecular approaches. Alburnoides holciki, was originally described by Coad and Bogutskaya (2012) from the Hari River Basin (Afghanistan and Iran). So far, this species is recorded

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Section: Resultssupporting

confidence: 90%

Section: Resultssupporting

confidence: 76%

DNA barcoding revealed a wider distribution of Alburnoides holciki (Teleostei: Leuciscidae) in the inland waters of Uzbekistan

2021

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“…However, the molecular data revealed a presence of altogether 17 evolutionary lineages of Alburnoides in Europe (Stierandová et al, 2016). Eleven of these were possible to assign to the previously described taxa (Levin et al, 2016;Stierandová et al, 2016;Barbieri et al, 2017), two are considered to represent yet undescribed species, while the Alburnoides prespensis complex requires further taxonomic clarification (Stierandová et al, 2016).…”

Section: Discussionmentioning

confidence: 94%

Occurrence of alien spirlin (Alburnoidessp.) in the Neretva river basin

Vukić

Eliášová

Marić³

et al. 2019

Knowl. Manag. Aquat. Ecosyst.

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Northern Mediterranean region is characterised by an exceptional richness of the freshwater ichthyofauna. Many fish species of this region are endemic to a single or a few river basins. This is also the case of the Neretva river basin (Adriatic Sea slope), where 17 out of 34 native species are endemic solely to this river basin. However, these unique Mediterranean freshwater ecosystems are fragile and are susceptible to human-induced changes, including introduction of alien fish species. We report here a finding of the 32 nd alien fish species in the Neretva river basin, spirlin Alburnoides sp., which was found at two localities in Bosnia and Herzegovina. The spirlin species was identified by molecular means as so far unnamed species with the native range in the Sava river basin (Danube river basin, Black Sea slope). Based on the comparison of cytochrome b sequences, the introduced population originated most probably from nearby rivers of the Danube basin in Bosnia and Herzegovina (Vrbas and Bosna river basins). Such a high number of alien fish species reported in a single river basin is alarming and pointing to a necessity of raising public awareness, especially among local fishermen.

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“…Furthermore, one potentially new species within the A. gmelini species has been reported. Despite the limited ability of COI to infer phylogenetic relationships, a study had furnished a shred of evidence that the Ponto-Caspian lineage of Alburnoides includes a significantly larger number of species from the Caspian Sea basin and inland basins of Central Asia [27]. CO1 barcoding region additionally offered opportunities to discover fish caterpillar separated from the great barrier deep sea.…”

Section: Dna Barcoding In Marine Lifementioning

confidence: 99%

Pragmatic Applications and Universality of DNA Barcoding for Substantial Organisms at Species Level: A Review to Explore a Way Forward

Ahmed

Ibrahim

Nantasenamat

et al. 2022

BioMed Research International

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DNA barcodes are regarded as hereditary succession codes that serve as a recognition marker to address several queries relating to the identification, classification, community ecology, and evolution of certain functional traits in organisms. The mitochondrial cytochrome c oxidase 1 (CO1) gene as a DNA barcode is highly efficient for discriminating vertebrate and invertebrate animal species. Similarly, different specific markers are used for other organisms, including ribulose bisphosphate carboxylase (rbcL), maturase kinase (matK), transfer RNA-H and photosystem II D1-ApbsArabidopsis thaliana (trnH-psbA), and internal transcribed spacer (ITS) for plant species; 16S ribosomal RNA (16S rRNA), elongation factor Tu gene (Tuf gene), and chaperonin for bacterial strains; and nuclear ITS for fungal strains. Nevertheless, the taxon coverage of reference sequences is far from complete for genus or species-level identification. Applying the next-generation sequencing approach to the parallel acquisition of DNA barcode sequences could greatly expand the potential for library preparation or accurate identification in biodiversity research. Overall, this review articulates on the DNA barcoding technology as applied to different organisms, its universality, applicability, and innovative approach to handling DNA-based species identification.

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DNA barcoding of the fishes of the genus Alburnoides (Actinopterygii, Cyprinidae) from Caucasus

Cited by 25 publications

References 42 publications

DNA barcoding revealed a wider distribution of Alburnoides holciki (Teleostei: Leuciscidae) in the inland waters of Uzbekistan

DNA barcoding revealed a wider distribution of Alburnoides holciki (Teleostei: Leuciscidae) in the inland waters of Uzbekistan

Occurrence of alien spirlin (Alburnoidessp.) in the Neretva river basin

Pragmatic Applications and Universality of DNA Barcoding for Substantial Organisms at Species Level: A Review to Explore a Way Forward

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