Abstract. Considering the high incidence of dogs with acute bacterial cystitis (BC) and the relationship among inflammation, genotoxicity, and carcinogenesis, we conducted a case-control study comparing the frequency of deoxyribonucleic acid (DNA) lesions assessed by the comet assay between disease-free animals (13 males and 13 females) and cytology-confirmed cases of acute BC (12 males and 12 females), which was mainly caused by Staphylococcus sp. (40%) and Escherichia coli (35%). The results show no increase in DNA damage in cells obtained by bladder washings and no influence of age, sex, and breed due to acute BC. In conclusion, DNA damage was seemingly not associated with the infection by specific bacteria.Key words: Acute bacterial cystitis; comet assay; DNA damage; dogs; urothelial cells.Bacterial cystitis (BC) is the most frequent inflammatory disease affecting the urinary bladder of dogs and humans. 2 It is known that inflammatory processes cause genotoxicity, mainly by causing oxidative deoxyribonucleic acid (DNA) damage. 7 Although DNA mutations are strongly associated with cancer, the inflammatory process is only associated with malignancy when inflammation is chronic. 7 To investigate whether acute BC can induce genetic damage in canine urinary bladder epithelium, we measured primary DNA damage (i.e., strand breaks, alkali-labile sites, incomplete-repair sites, and cross-links) in exfoliated epithelial cells obtained by bladder washing. Damage was assessed by the comet assay, a simple and sensitive methodology for DNA damage estimation at the single-cell level. 11 Dogs were from the ambulatory service of the Veterinary Medicine Hospital UNESP, Botucatu, Brazil. The cytologic criteria used to define acute BC were the presence of numerous neutrophils (i.e., Ͼ 70% of cells obtained), presence of bacteria, and abnormalities in epithelial cells, such as hyperchromatic nuclei and perinuclear halos. Hyperplastic or dysplastic changes (cluster formation, nuclear variability, or increases in nuclear-cytoplasm ratio) were not observed in these specimens, excluding, therefore, the likelihood of chronic disease. 1 Twenty-four cytology-confirmed acute BC