I have found that antineoplastic drugs which are known to be inhibitors of mammalian DNA topoisomerases have pronounced and selective effects on simian virus 40 DNA replication. Ellipticine, 4'-(9-acridinylamino)methanesulfon-m-aniside, and Adriamycin blocked decatenation of newly replicated simian virus 40 daughter chromosomes in vivo. The arrested decatenation intermediates produced by these drugs contained single-strand DNA breaks. Ellipticine in particular produced these catenated dimers rapidly and efficiently. Removal of the drug resulted in rapid reversal of the block and completion of decatenation. The demonstration that these drugs interfere with decatenation suggests that they may exert their cytotoxic and antineoplastic effects by preventing the separation of newly replicated cellular chromosomes. Camptothecin rapidly breaks replication forks in growing Cairns structures. It is likely that the target of camptothecin is the "swivel" topoisomerase required for DNA replication and that it is located at or very near the replication fork in vivo. Evidence is presented that many of the broken Cairns structures are in fact half-completed sister chromatid exchanges. One pathway for the resolution of these structures is completion of the sister chromatid exchange to produce a circular head-to-tail dimer.DNA topoisomerases are now recognized as important targets for cancer chemotherapy (for reviews, see references 20 and 32). A number of cytotoxic drugs which were found to have antineoplastic properties have recently been shown to be topoisomerase inhibitors (3,12,15,25,26,31,33). These drugs typically interfere with the breakage-reunion cycles of topoisomerases to produce single-and double-strand DNA breaks. Recent studies have shown a correlation between cytotoxicity and levels of DNA strand breakage caused by these drugs (6,7,21). It is also possible that these drugs can exert their cytotoxic and antineoplastic effects through interference with reactions that require topoisomerases, such as replication fork progression, transcription, and separation (decatenation) of newly replicated daughter chromosomes. The work reported here demonstrates that topoisomerase inhibitors can selectively and reversibly interfere either with replication forks or with the decatenation process in simian virus 40 (SV40) DNA replication. Improved understanding of the modes of action of this class of drugs should aid in the rational design of a second generation of antineoplastic topoisomerase inhibitors.MATERIALS AND METHODS Cell culture and virus infection. African green monkey kidney cells (CV-1) were grown in Eagle minimal essential medium (Gibco) supplemented with 14 mM HEPES (N-2-hydroxyethylpiperazine-N'-2-ethanesulfonic acid, pH 7.2) and 4 mM NaHCO3. Cells were infected with SV40 strain 777 at a multiplicity of 10 PFU/cell, and experiments were carried out 36 h after infection at the peak of SV40 DNA replication.Radiolabeling and preparation of viral DNA. Replicating SV40 DNA was pulse-labeled with [methyl-3H]thymidine as in...