Human
milk oligosaccharides (HMOs) are an unconjugated class of
glycans that have been implicated for their role in promoting the
healthy development of the brain–gut axes of infants. Production
of HMOs is ever-changing and specifically tailored for each infant
in response to various biological factors (e.g.,
cognitive development, diseases, or allergies). While every HMO consists
of up to only five monosaccharides, their structures can be composed
of many possible glycosidic linkage positions and corresponding α/β
anomericities, linear or branched chains, and potential fucosylation/sialylation
modifications, thus leading to a tremendous degree of isomeric heterogeneity.
With limited availability of authentic standards for every putative
HMO structure (estimated to be >200 total), new analytical methods
are needed for their accurate characterization. Complete sequencing
of the human milk glycome would enable a better understanding of their
infant-specific biological roles and potentially lead to their widespread
incorporation into infant formula. Herein, we explore the use of our
high-resolution cyclic ion mobility spectrometry–mass spectrometry
(cIMS–MS)-based platform for the separation of core disaccharide
and trisaccharide isomer building blocks as a first step toward the
sequencing of larger HMOs. By utilizing the flexible capabilities
of the cIMS array, separation pathlengths were extended up to 40 m,
thus enabling the resolution of all seven sets of sialylated, fucosylated
galactosyllactose and lactosamine HMO building block isomers. Additionally,
we assessed the utility of pre-/post-cIMS tandem mass spectrometry
(MS/MS) and tandem cIMS (cIMS/cIMS) for the characterization of HMOs
based on their diagnostic fragmentation patterns and mobility fingerprints.
We anticipate that our presented cIMS–MS-based methodology
will enable the better characterization of larger, unknown HMOs when
incorporated into an overall workflow that also includes online liquid
chromatography and enzymatic hydrolyses.