Peripheral blood stem cells (PBSC) or bone marrow (BM) is selected as the graft source in the setting of allogeneic hematopoietic stem cell transplantation from HLA-matched related donors. To clarify the prognostic impact of graft sources in patients with adult T-cell leukemia/lymphoma (ATL), we performed a retrospective study using a propensity score analysis. In the entire population, 124 and 274 patients received transplantation with BM and PBSC, respectively. In the inverse probability of treatment weighting method, BM transplantation achieved comparable overall survival (OS)(P=0.593), chronic graft-versus-host disease (GVHD)- and relapse-free survival (CRFS)(P=0.317), and GVHD- and relapse-free survival (P=0.569) to PBSC transplantation. In the propensity score-matched subset (BM, n=120; PBSC, n=120), no significant differences were observed in OS (P=0.350), the incidence of relapse (P=0.335), or non-relapse mortality (P=0.924). PBSC transplantation showed faster neutrophil engraftment (P<0.001) and a higher incidence of severe acute GVHD (P=0.006) than BM transplantation. The development of grade I-II acute GVHD was associated with better OS in both BM (P=0.001) and PBSC transplantation (P=0.009), indicating the benefit of acute GVHD-associated graft-versus-ATL effects. The present study demonstrated that BM grafts provided a curative outcome along with graft-versus-ATL effects, similar to PBSC grafts, when patients underwent transplantation from HLA-matched related donors.