Background Little is known about the challenges and barriers to tuberculosis (TB) service delivery in hard-to-reach riverine populations in Nigeria. The missing TB cases in such key populations need to be found if the End TB targets are to be met. This study explored perceptions and attitudes related to TB, as well as the level of diagnostic and treatment delays in communities of the riverine Niger Delta.Methods This was an exploratory mixed-methods study carried out in two states (Bayelsa and Delta) situated in the Niger Delta region in Nigeria. It consisted of quantitative surveys of community members and TB patients, FGDs with community members and KIIs with health care workers.Results The questionnaire survey was completed by 597 community members (51.6% female) and 51 TB patients (56.9% female); 73 community members and 15 HCWs participated in FGDs and interviews respectively. Community members’ mean [SD] knowledge and attitude scores were 6.1/10 [2.2] and 4.8/12 [1.9] respectively. Older age (>40y) (p=0.04) and regular income (p<0.001) were independent predictors of TB knowledge. Good TB knowledge (aOR 2.5; 95% C.I. 1.5 – 4.4) and formal education (aOR 5.8; 95% C.I. 1.3 – 25.6) were associated with positive TB attitudes. Patients’ TB knowledge was similar at 6.8/8 [1.5]. Most (98.8%) respondents took >1 hour to access the nearest diagnostic centre. Mean patient-related and health system-related diagnostic delays were 16.3 and 3.7 weeks respectively. Mean treatment delay was found to be 0.5 weeks. Patient-related, financial, cultural and structural barriers were found to delay TB diagnosis and treatment in this environment. Belief in faith healing and herbal remedies, transport barriers, and negative HCW attitudes were prominent themes in FGDs. Problems transporting sputum samples and tracing mobile communities were primary HCW complaints.Conclusions A number of barriers affect TB service delivery in hard-to-reach riverine communities in Nigeria. Our study suggests that an appropriately designed community intervention can improve TB service delivery in these communities. The main focus will be to address information asymmetry between service providers and the community, empower affected communities to find cases, engage informal providers such as patent medicine vendors, and strengthen the health system.