Chem. 277, 34508 -34520). To further investigate this effect in more detail, ␣-and -semihemoglobins, namely, ␣(heme)(apo) and ␣(apo)(heme), respectively, were prepared and characterized with respect to the impact of allosteric effectors on both conformation and ligand binding properties. Semihemoglobins are dimers characterized by a high affinity for oxygen and lack of cooperativity. We found that, compared with stripped conditions, semihemoglobins responded to effectors (inositol hexaphosphate and L35) by decreasing the affinity for oxygen by 60-and 130-fold for ␣-and -semihemoglobins, respectively. 1 H NMR and sedimentation velocity experiments carried out with their ligated and unligated forms in the absence and presence of effectors revealed that semihemoglobins always remain as singleheme-carrying dimers. Recombination kinetics of their photolyzed CO derivatives showed that effectors did indeed interact with their ligated forms. Measurements of the Fe-His stretching mode show that the semihemoglobins undergo a large ligand binding-induced conformational shift and that both ligand-free and ligand derivatives respond to the presence of effectors. Contradictions to the Monod-Wyman-Changeaux/Perutz allosteric model arise since 1) the modulation of ligand affinity is not achieved in semihemoglobins by the formation of a low affinity T conformation (quaternary effect) but by direct interaction with effectors, 2) effectors do interact significantly with ligated forms of high affinity semihemoglobins, and 3) modulation of the ligand affinity and the cooperativity are not necessarily linked but instead can be separated into two distinct phenomena that can be isolated.Hemoglobin (Hb), 1 the oxygen transport protein in blood, is a tetrameric molecule composed by the assembly of two identical ␣ heterodimers in which each subunit carries a heme group to which oxygen binds reversibly. This ligation process is characterized by a phenomenon called cooperativity; each successive ligation of the hemes within a tetramer is accompanied by a progressive increase in the affinity for oxygen of the remaining hemes. Cooperativity can be described by the so-called twostate or Monod-Wyman-Changeaux (MWC) allosteric model (1), which proposes that Hb is allowed to assume only two conformations, T or tense, characterized by a low affinity for the ligand and typical of the unligated form, and R or relaxed, with high affinity and typical of the ligated form. Progressive ligation shifts eventually the allosteric equilibrium from T to R.With the proposal by Perutz (2) of his stereochemical mechanism, the correlation of two distinct molecular structures, unligated and ligated, with the so-called quaternary T and quaternary R functional conformations, respectively, was tacitly established. The T conformation was stabilized by an intricate network of interdimeric interactions, namely, salt bridges and hydrogen bonds formed mainly between ␣1 and 2 (or ␣2 and 1). Upon ligation of the hemes, these interactions broke apart, releasing the al...