INS-VNTR (insulin-variable number of tandem repeats)and AIRE (autoimmune regulator) have been associated with the modulation of insulin gene expression in thymus, which is essential to induce either insulin tolerance or the development of insulin autoimmunity and type 1 diabetes. We sought to analyze whether each functional domain of AIRE is critical for the activation of INS-VNTR in human thymic epithelial cells. Twelve missense or nonsense mutations in AIRE and two chimeric AIRE constructs were generated. A luciferase reporter assay and a pulldown assay using biotinylated INS-class I VNTR probe were performed to examine the transactivation and binding activities of WT, mutant, and chimeric AIREs on the INS-VNTR promoter. Confocal microscopy analysis was performed for WT or mutant AIRE cellular localization. We found that all of the AIRE mutations resulted in loss of transcriptional activation of INS-VNTR except mutant P252L. Using WT/mutant AIRE heterozygous forms to modulate the INS-VNTR target revealed five mutations (R257X, G228W, C311fsX376, L397fsX478, and R433fsX502) that functioned in a dominant negative fashion. The LXXLL-3 motif is identified for the first time to be essential for DNA binding to INS-VNTR, whereas the intact PHD1, PHD2, LXXLL-3, and LXXLL-4 motifs were important for successful transcriptional activation. AIRE nuclear localization in the human thymic epithelial cell line was disrupted by mutations in the homogenously staining region domain and the R257X mutation in the PHD1 domain. This study supports the notion that AIRE mutation could specifically affect human insulin gene expression in thymic epithelial cells through INS-VNTR and subsequently induce either insulin tolerance or autoimmunity.
Type 1 diabetes (T1D)2 is defined by absolute loss of insulin secretion due to the autoimmune destruction of insulin-producing  cells in the pancreas. There are a few target autoantigens identified in  cell autoimmune destruction with insulin and pro-insulin auto-antibodies detected in 23 and 34% of T1D patients, respectively (1, 2). The autoimmune polyendocrinopathy type 1 syndrome (APS-1 also known as APECED) is an autosomal recessive, monogenic form of human autoimmunity that is characterized by autoimmune destruction of multiple endocrine organs and defective cell-mediated immunity (3, 4).In 1997 an autoimmune regulator (AIRE) gene, which underlies APS-1, was identified on chromosome 21q22.3 using a positional cloning strategy (5, 6). The specific domains that the AIRE protein contains include (i) the N terminus of a homogenously staining region (HSR) domain and/or caspase recruitment domain (CARD), which is believed to be involved in dimerization and/or caspase recruitment (7, 8), (ii) a nuclear localization signal, (iii) a SAND (Sp100, AIRE-1, NucP41/75, DEAF-1) domain, which is thought to be involved in DNA binding (9), and (iv), two plant homeodomain (PHD) type zinc fingers (10, 11) and four LXXLL motifs (12). The AIRE protein has been shown to activate hundreds of tissue-restricted anti...