Quantitative evaluation
of small molecule permeation and accumulation
in Gram-negative bacteria is important for drug development against
these bacteria. While these measurements are commonly performed at
physiological pH, Escherichia coli and many other
Enterobacteriaceae infect human gastrointestinal and urinary tracts,
where they encounter different pH conditions. To understand how external
pH affects permeation and accumulation of small molecules in E. coli cells, we apply second harmonic generation (SHG)
spectroscopy using SHG-active antimicrobial compound malachite green
as the probe molecule. Using SHG, we quantify periplasmic and cytoplasmic
accumulations separately in live E. coli cells, which
was never done before. Compartment-wise measurements reveal accumulation
of the probe molecule in cytoplasm at physiological and alkaline pH,
while entrapment in periplasm at weakly acidic pH and retention in
external solution at highly acidic pH. Behind such disparity in localizations,
up to 2 orders of magnitude reduction in permeability across the inner
membrane at weakly acidic pH and outer membrane at highly acidic pH
are found to play key roles. Our results unequivocally demonstrate
the control of external pH over entry and compartment-wise distribution
of small molecules in E. coli cells, which is a vital
information and should be taken into account in antibiotic screening
against E. coli and other Enterobacteriaceae members.
In addition, our results demonstrate the ability of malachite green
as an excellent SHG-indicator of changes of individual cell membrane
and periplasm properties of live E. coli cells in
response to external pH change from acidic to alkaline. This finding,
too, has great importance, as there is barely any other molecular
probe that can provide similar information.