Draft genome sequence and functional analysis of Lysinibacillus xylanilyticus t26, a plant growth-promoting bacterium isolated from Capsicum chinense rhizosphere

Phazna, T A; Ngashangva, Ng; Yentrembam, Randhir Babu Singh; Maurya, Ranjeet; Sharma, Chandradev; Verma, Praveen Kumar; Sarangthem, Indira

doi:10.1007/s12038-022-00264-9

Cited by 5 publications

(2 citation statements)

References 61 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Rossellomorea has been reported as a plant growth-promoting bacterium and a microbial inoculant to remediate heavy metal-polluted soils [42]. The plant growth-promoting property has also been found in the members of genera Fictibacillus [43], Halobacillus [44], Lysinibacillus [45], and Paenibacillus [46]. These findings demonstrated that the proteinase-producing Planococcus genus and Bacillus-like bacterial community were potential bacterial inoculants to increase the yield of the crops and improve the quality of the planting soils.…”

Section: The Dominant Bacterial Community and Proteinase-producing Ba...mentioning

confidence: 87%

Impact of Sea Rice Planting on Enzymatic Activity and Microbial Community of Coastal Soils: Focus on Proteinase

et al. 2023

View full text Add to dashboard Cite

Soil proteinase and proteinase-producing microbial community are closely associated with soil fertility and soil health. Sea rice has been planted in the coastal beach of Jiaozhou Bay, China, in an effort to transform saline-alkali soil into arable land. However, the knowledge regarding the bacterial degradation of organic nitrogen in sea rice soils is limited. This study aims to investigate the physicochemical characteristics and enzymatic activities of the sea rice soils, as well as the microbial communities by both the Illumina sequencing-based culture-independent technology and culture-dependent methods. Sea rice soils exhibited a lower salinity and higher organic matter content and proteinase activity, as well as an increase in both the richness and diversity of the proteinase-producing bacterial community, compared to the adjacent non-rice soils. The Proteobacteria phylum and the Gammaproteobacteria class were dominant in sea rice soils, showing higher abundance than in the reference soils. The Planococcus genus and Bacillus-like bacterial communities were abundant in the cultivable proteinase-producing bacteria isolated from sea rice soils. Furthermore, a significant proportion of the extracellular proteinase produced by the isolated soil bacteria consisted of serine proteinases and metalloproteinases. These findings provided new insights into the degradation of soil organic nitrogen in coastal agricultural regions.

show abstract

Section: The Dominant Bacterial Community and Proteinase-producing Ba...mentioning

confidence: 87%

Impact of Sea Rice Planting on Enzymatic Activity and Microbial Community of Coastal Soils: Focus on Proteinase

et al. 2023

View full text Add to dashboard Cite

show abstract

“…The draft genome sequencing of Citrobacter braakii AN-PRR1 by Nawaz et al [26] revealed genes for PGP activites. The draft genome sequencing of Lysinibacillus xylanilyticus t26 by Phazna et al [27] revealed siderophore production pathways and plant growth response bioassays. The draft genome sequences of the novel strains, Devosia rhizoryzae LEGU1 T and Devosia oryziradicis G19 T , revealed the biosynthesis of Fe-chelating, auxin-accessible, and tryptophan biosynthetic genes [28].…”

mentioning

confidence: 99%

Rhizospheric microbiomes for agricultural sustainability

Yadav,

Kour,

Yadav

2024

J App Biol Biotech

View full text Add to dashboard Cite

Agricultural sustainability rests on a foundation of microbial diversity and activity. Soil consists of a rich biodiversity of microorganisms belongs to all three domains of life, i.e., archaea, bacteria, and eukarya. The rhizosphere is the plenty of extensively colonized zone of the soil due to the availability of nutrients to the microorganisms. The rhizospheric zone is one of the largest ecosystems, with the bacterial population being predominant. Bacteria in the rhizospheric region benefit the plants by stimulating their growth and productivity through diverse mechanisms, including the production of plant growth regulators and siderophores, the fixation of atmospheric nitrogen, and the solubilization of unavailable and insoluble macro-and micro-nutrients. Plant growth-promoting (PGP) rhizomicrobiomes protect the plants against phytopathogens by producing antibiotics, extra-cellular hydrolytic enzymes, prussic acid, and ammonia. Furthermore, PGP rhizomicrobiomes also help the plants under abiotic stress from cold, salinity, drought, and heavy metals by lowering the levels of inhibitory ethylene, increasing the accumulation of osmolytes in the plants, and production of the reactive oxygen species scavengers. PGP rhizomicrobiomes belong to diverse phyla of the domain archaea, bacteria, and eukarya, in which the predominant members are Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria. These beneficial rhizomicrobiomes could be used as bioinculants for agricultural sustainability.Bacterial diversity in the rhizospheric region can be examined by various methodologies. A range of culture media have been designed for the isolation of culturable rhizobacteria [1]. In addition to traditional methods of isolation, bacterial diversity can be characterized at the molecular level by polymerase chain

show abstract

Bioinformatics study to unravel the role of rhizobiome to biologically control the pathogens in vegetables

2023

View full text Add to dashboard Cite

Draft genome sequence and functional analysis of Lysinibacillus xylanilyticus t26, a plant growth-promoting bacterium isolated from Capsicum chinense rhizosphere

Cited by 5 publications

References 61 publications

Impact of Sea Rice Planting on Enzymatic Activity and Microbial Community of Coastal Soils: Focus on Proteinase

Impact of Sea Rice Planting on Enzymatic Activity and Microbial Community of Coastal Soils: Focus on Proteinase

Rhizospheric microbiomes for agricultural sustainability

Bioinformatics study to unravel the role of rhizobiome to biologically control the pathogens in vegetables

Contact Info

Product

Resources

About