Draft Genome Sequence of Pannonibacter indicus Strain HT23
            <sup>T</sup>
            (DSM 23407
            <sup>T</sup>
            ), a Highly Arsenate-Tolerant Bacterium Isolated from a Hot Spring in India

Bandyopadhyay, Saumya; Whitman, William B.; Das, Subrata K.

doi:10.1128/genomea.00283-17

Cited by 4 publications

(1 citation statement)

References 12 publications

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“…The genus Pannonibacter belongs to the Stappiaceae, a family included among the Alphaproteobacteria. To our knowledge, just three species, namely, P. carbonis, P. indicus, and P. phragmitetus, have been described and included in the genus Pannonibacter [1][2][3]. Interestingly, the taxon includes species that have been isolated in natural habitats, all associated with water sources and soil contact such as lakes, hot springs, and mine waters.…”

Section: Introductionmentioning

confidence: 99%

Pannonibacter anstelovis sp. nov. Isolated from Two Cases of Bloodstream Infections in Paediatric Patients

Castellana,

De Laurentiis,

Bianco

et al. 2024

Microorganisms

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This study describes two cases of bacteraemia sustained by a new putative Pannonibacter species isolated at the U.O.C. of Microbiology and Virology of the Policlinico of Bari (Bari, Italy) from the blood cultures of two patients admitted to the Paediatric Oncohaematology Unit. Pannonibacter spp. is an environmental Gram-negative bacterium not commonly associated with nosocomial infections. Species identification was performed using Sanger sequencing of the 16S rRNA gene and Whole-Genome Sequencing (WGS) for both strains. Genomic analyses for the two isolates, BLAST similarity search, and phylogeny for the 16S rDNA sequences lead to an assignment to the species Pannonibacter phragmitetus. However, by performing ANIb, ANIm, tetranucleotide correlation, and DNA-DNA digital hybridization, analyses of the two draft genomes showed that they were very different from those of the species P. phragmitetus. MALDI-TOF analysis, assessment of antimicrobial susceptibility by E-test method, and Analytical Profile Index (API) tests were also performed. This result highlights how environmental bacterial species can easily adapt to the human host and, especially in nosocomial environments, also gain pathogenic potential through antimicrobial resistance.

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Section: Introductionmentioning

confidence: 99%

Pannonibacter anstelovis sp. nov. Isolated from Two Cases of Bloodstream Infections in Paediatric Patients

Castellana,

De Laurentiis,

Bianco

et al. 2024

Microorganisms

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Hot Springs of India: Occurrence and Microbial Diversity

Rao¹,

Liu²,

Jiao³

et al. 2018

Extremophiles in Eurasian Ecosystems: Ecology, Diversity, and Applications

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Microbiological studies of hot springs in India: a review

Poddar

Das

2017

Arch Microbiol

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The earliest microbiological studies on hot springs in India date from 2003, a much later date compared to global attention in this striking field of study. As of today, 28 out of 400 geothermal springs have been explored following both culturable and non-culturable approaches. The temperatures and pH of the springs are 37-99 °C and 6.8-10, respectively. Several studies have been performed on the description of novel genera and species, characterization of different bio-resources, metagenomics of hot spring microbiome and whole genome analysis of few isolates. 17 strains representing novel species and many thermostable enzymes, including lipase, protease, chitinase, amylase, etc. with potential biotechnological applications have been reported by several authors. Influence of physico-chemical conditions, especially that of temperature, on shaping the hot spring microbiome has been established by metagenomic investigations. Bacteria are the predominant life forms in all the springs with an abundance of phyla Firmicutes, Proteobacteria, Actinobacteria, Thermi, Bacteroidetes, Deinococcus-Thermus and Chloroflexi. In this review, we have discussed the findings on all microbiological studies that have been carried out to date, on the 28 hot springs. Further, the possibilities of extrapolating these studies for practical applications and environmental impact assessment towards protection of natural ecosystem of hot springs have also been discussed.

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Draft Genome Sequence of Pannonibacter indicus Strain HT23 ^T (DSM 23407 ^T ), a Highly Arsenate-Tolerant Bacterium Isolated from a Hot Spring in India

Abstract: Pannonibacter indicus strain HT23T, a highly arsenate-tolerant bacterium, was isolated from a tropical hot spring. The estimated genome is 4.2 Mb with 3,818 protein-coding sequences containing putative genes, some of which are involved in arsenate resistance.

Cited by 4 publications

References 12 publications

Pannonibacter anstelovis sp. nov. Isolated from Two Cases of Bloodstream Infections in Paediatric Patients

Pannonibacter anstelovis sp. nov. Isolated from Two Cases of Bloodstream Infections in Paediatric Patients

Hot Springs of India: Occurrence and Microbial Diversity

Microbiological studies of hot springs in India: a review

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Draft Genome Sequence of Pannonibacter indicus Strain HT23 T (DSM 23407 T ), a Highly Arsenate-Tolerant Bacterium Isolated from a Hot Spring in India

Abstract: Pannonibacter indicus strain HT23T, a highly arsenate-tolerant bacterium, was isolated from a tropical hot spring. The estimated genome is 4.2 Mb with 3,818 protein-coding sequences containing putative genes, some of which are involved in arsenate resistance.

Cited by 4 publications

References 12 publications

Pannonibacter anstelovis sp. nov. Isolated from Two Cases of Bloodstream Infections in Paediatric Patients

Pannonibacter anstelovis sp. nov. Isolated from Two Cases of Bloodstream Infections in Paediatric Patients

Hot Springs of India: Occurrence and Microbial Diversity

Microbiological studies of hot springs in India: a review

Contact Info

Product

Resources

About

Draft Genome Sequence of Pannonibacter indicus Strain HT23 ^T (DSM 23407 ^T ), a Highly Arsenate-Tolerant Bacterium Isolated from a Hot Spring in India