Insofar as genetic susceptibility to type 1 diabetes is associated with HLA class II genes, with certain allelic combinations conferring disease susceptibility or resistance, this study assessed the distributions of HLA-DR and -DQ among 107 unrelated patients with type 1 diabetes and 88 healthy controls from Bahrain, all of Arab origin. The HLA-DRB and -DQB genotypes were determined by PCR-sequence-specific priming. The following alleles showed the strongest association with type 1 diabetes among patients versus controls according to their frequencies: DRB1*030101 (0.430 versus 0.097; P < 0.001), DRB1*040101 (0.243 versus 0.034; P < 0.001), DQB1*0201 (0.467 versus 0.193; P < 0.001), and DQB1*0302 (0.229 versus 0.091; P < 0.001). When the frequencies of alleles in controls were compared to those in patients, negative associations were seen for DRB1*100101 (0.085 versus 0.014; P < 0.001), DRB1*110101 (0.210 versus 0.060; P < 0.001), DQB1*030101 (0.170 versus 0.075; P ؍ 0.006), and DQB1*050101 (0.335 versus 0.121; P < 0.001). In addition, the DRB1*030101-DQB1*0201 (70.1 versus 22.7%; P < 0.001) and DRB1*030101-DQB1*0302 (21.5 versus 0.0%; P < 0.001) genotypes were more prevalent among patients, thereby conferring disease susceptibility, whereas the DRB1*100101-DQB1*050101 (20.5 versus 2.8%; P < 0.001), DRB1*110101-DQB1*030101 (28.4 versus 8.4%; P < 0.001), and DRB1*110101-DQB1*050101 (30.7 versus 0.9%; P < 0.001) genotypes were more prevalent among controls, thus assigning a protective role. These results confirm the association of specific HLA-DR and -DQ alleles and haplotypes with type 1 diabetes and may underline several characteristics that distinguish Bahraini patients from other Caucasians patients.Type 1 diabetes is an autoimmune disease characterized by insulin insufficiency resulting from a progressive immunologic destruction of insulin-secreting pancreatic  islet cells by autoreactive leukocytes and their mediators (2). Although the exact the nature of the inducing agent(s) and the sequence of events leading to the destruction of  islet cells and, subsequently, hyperglycemia are not completely understood, it is well established that susceptibility to type 1 diabetes is determined by environmental and genetic factors (7,25). Many susceptibility loci have been described previously, including the HLA (IDDM1) and insulin (IDDM2) gene regions (2, 5, 18), while other loci will undoubtedly be identified in the future.Mapping studies with genes from patients with type 1 diabetes confirmed the association of specific major histocompatibility complex class II alleles with the risk of disease development (5, 14, 25). It was proposed that both susceptible and protective alleles at the DRB1, DQA1, and DQB1 loci were associated with the pathogenesis of the disease (14, 20), exemplified by the strong association of the HLA-DR3 and -DR4 and the HLA-DQA1 and -DQB1 alleles with type 1 diabetes (9, 16) and the negative association of the HLA-DR2 and DQB1*0602 alleles with type 1 diabetes (21). It was also apparent that ...