bAs anti-HIV therapy becomes more widely available in developing nations, it is clear that drug resistance will continue to be a major problem. The related viruses HIV-1 and HIV-2 share many of the same resistance pathways to nucleoside reverse transcriptase inhibitors (NRTIs). However, clinical data suggest that while HIV-1 reverse transcriptase (RT) usually uses an ATP-dependent excision pathway to develop resistance to the nucleoside analog zidovudine (AZT), HIV-2 RT does not appear to use this pathway. We previously described data that suggested that wild-type (WT) HIV-2 RT has a much lower ability to excise AZT monophosphate (AZTMP) than does WT HIV-1 RT and suggested that this is the reason that HIV-2 RT more readily adopts an exclusion pathway against AZT triphosphate (AZTTP), while HIV-1 RT is better able to exploit the ATP-dependent pyrophosphorolysis mechanism. However, we have now done additional experiments, which show that while HIV-1 RT can adopt either an exclusion-or excision-based resistance mechanism against AZT, HIV-2 RT can use only the exclusion mechanism. All of our attempts to make HIV-2 RT excision competent did not produce an AZT-resistant RT but instead yielded RTs that were less able to polymerize than the WT. This suggests that the exclusion pathway is the only pathway available to HIV-2.
HIV-1 infection has been the target of various multidrug therapies, but to date, the effectiveness of all anti-HIV drugs has been blunted by drug-resistant mutations that arise in the genome of the virus. Reverse transcriptase (RT) is an enzyme that contains two enzymatic activities, a DNA polymerase that can copy either an RNA or DNA template, and an RNase H, which degrades RNA if the RNA is part of an RNA/DNA duplex. RT uses these two enzymatic activities to convert the single-stranded RNA genome of the virus into a double-stranded DNA that can be integrated into the genome of the host cell. The synthesis of a DNA copy of the viral genome is a crucial step in the life cycle of the virus, and RT has, for that reason, been the target of a number of different anti-HIV drugs (for reviews, e.g., see references 2, 12, 17, 19, 21, 23, 31, and 32). The earliest anti-HIV therapies involved nucleoside RT inhibitors (NRTIs). These analogs enter the cell and are converted to the triphosphate form (nucleoside RT inhibitor triphosphates [NRTI-TPs]) by host cell kinases. Because the NRTI-TPs are analogs of the normal deoxynucleoside triphosphates (dNTPs), NRTI-TPs are incorporated into the primer strand by RT. However, because the NRTI-TPs do not have a 3=-OH group on the sugar or pseudosugar moiety, an NRTI monophosphate (NRTI-MP) that has been incorporated into viral DNA cannot support continued DNA synthesis and the primer chain is terminated. Decreased susceptibility to NRTIs means that the mutant RT has an enhanced ability to select normal dNTPs over the NRTI-TPs. Two primary mechanisms have been identified by which HIV-1 RT becomes less susceptible to the NRTITPs. One mechanism is exclusion, in which the m...