eagle-i: An Ontology-Driven Framework For Biomedical Resource Curation And Discovery

Segerdell, Erik; Wilson, Melanie; Bashor, Ted; Bourges-Waldegg, D.; Corday, Karen; Frost, H. Robert; Johnson, Tenille; Shaffer, Christopher J.; Stone, Larry; Torniai, Carlo; Haendel, Melissa

doi:10.1038/npre.2010.5176

Cited by 2 publications

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“…This capability is especially useful for the representation of non-model organism data. For instance, the eagle-i project captures information about a diversity of non-model organisms [ 55 , 56 ] using Uberon classes whereby the relevant species is specified (for example, a muskox 'brain'). The utility of referencing a taxonomically general class in combination with a given taxon will be invaluable as new genomes are sequenced and non-model organism expression and phenotype data become available.…”

Section: Discussionmentioning

confidence: 99%

Uberon, an integrative multi-species anatomy ontology

et al. 2012

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We present Uberon, an integrated cross-species ontology consisting of over 6,500 classes representing a variety of anatomical entities, organized according to traditional anatomical classification criteria. The ontology represents structures in a species-neutral way and includes extensive associations to existing species-centric anatomical ontologies, allowing integration of model organism and human data. Uberon provides a necessary bridge between anatomical structures in different taxa for cross-species inference. It uses novel methods for representing taxonomic variation, and has proved to be essential for translational phenotype analyses. Uberon is available at http://uberon.org

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Section: Discussionmentioning

confidence: 99%

Uberon, an integrative multi-species anatomy ontology

et al. 2012

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“…In POLARISCO, we reused DO's categorization of diseases as shown in Figure 6. To represent healthcare resources, we reused classes from the eagle-i resource ontology (ERO) (Segerdell et al, 2010), a modular suite of ontologies that uses BFO as top-level ontology and reuses the Biomedical Resource Ontology (BRO) (Tenenbaum et al, 2011) in order to represent biomedical resources. In POLARISCO we focus on ERO's instruments module in order to have a means of specifying the medical equipment available in given hospitals.…”

Section: The Healthcare Resources Module Of Polariscomentioning

confidence: 99%

Ontology-Driven Multicriteria Decision Support for Victim Evacuation

Elmhadhbi

Karray

Archimède

et al. 2021

Int. J. Info. Tech. Dec. Mak.

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In light of the complexity of unfolding disasters, the diversity of rapidly evolving events, the enormous amount of generated information, and the huge pool of casualties, emergency responders (ERs) may be overwhelmed and in consequence poor decisions may be made. In fact, the possibility of transporting the wounded victims to one of several hospitals and the dynamic changes in healthcare resource availability make the decision process more complex. To tackle this problem, we propose a multicriteria decision support service, based on the Analytic Hierarchy Process (AHP) method, that aims to avoid overcrowding and outpacing the capacity of a hospital to effectively provide the best care to victims by finding out the most appropriate hospital that meets the victims’ needs. The proposed approach searches for the most appropriate healthcare institution that can effectively deal with the victims’ needs by considering the availability of the needed resources in the hospital, the victim’s wait time to receive the healthcare, and the transfer time that represents the hospital proximity to the disaster site. The evaluation and validation results showed that the assignment of hospitals was done successfully considering the needs of each victim and without overwhelming any single hospital.

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eagle-i: An Ontology-Driven Framework For Biomedical Resource Curation And Discovery

Cited by 2 publications

References 0 publications

Uberon, an integrative multi-species anatomy ontology

Uberon, an integrative multi-species anatomy ontology

Ontology-Driven Multicriteria Decision Support for Victim Evacuation

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