Spores from a number of different Bacillus species are currently being used as human and animal probiotics, although their mechanisms of action remain poorly understood. Here we describe the isolation of 237 presumptive gut-associated Bacillus spp. isolates that were obtained by heat and ethanol treatment of fecal material from organically reared broilers followed by aerobic plating. Thirty-one representative isolates were characterized according to their morphological, physiological, and biochemical properties as well as partial 16S rRNA gene sequences and screening for the presence of plasmid DNA. The Bacillus species identified included B. subtilis, B. pumilus, B. licheniformis, B. clausii, B. megaterium, B. firmus, and species of the B. cereus group, whereas a number of our isolates could not be classified. Intrinsic properties of potential importance for survival in the gut that could be advantageous for spore-forming probiotics were further investigated for seven isolates belonging to five different species. All isolates sporulated efficiently in the laboratory, and the resulting spores were tolerant to simulated gastrointestinal tract conditions. They also exhibited antimicrobial activity against a broad spectrum of bacteria, including food spoilage and pathogenic organisms such as Bacillus spp., Clostridium perfringens, Staphylococcus aureus, and Listeria monocytogenes. Importantly, the isolates were susceptible to most of the antibiotics tested, arguing that they would not act as donors for resistance determinants if introduced in the form of probiotic preparations. Together, our results suggest that some of the sporeformers isolated in this study have the potential to persist in or transiently associate with the complex gut ecosystem.The widespread use of antibiotics as therapeutic and prophylactic agents and as growth promoters in animal husbandry has led to a worldwide increase in antibiotic resistance and the emergence of untreatable multidrug-resistant strains of bacteria (4, 33). This has prompted the European Union to phase out the use of these compounds as animal feed additives by 2006 (47). The use of competitive exclusion agents and probiotic feed additives in the livestock industry is therefore attracting increased attention as a cost-effective alternative to controlling animal disease and improving breeding performance (54).The genus Bacillus comprises a diverse collection of aerobic endospore-forming bacteria whose spores consist of several protective layers surrounding the nucleoid in the spore core (20, 51). This structural organization makes the spores extremely resistant to external physical and chemical insults and in part determines their exceptional longevity in the environment (20, 38). The resilient and ubiquitous nature of these bacteria results in considerable daily intake of these organisms by humans and animals. This ingestion, which is often in the form of spores, occurs primarily through contaminated food and water.Bacillus spores are being used as human and animal probiotics...