Taste is crucial to meat quality, and free Glu is an important taste-active component in meat. Our recent study showed that the short-term feeding of a low-Lys diet increases the concentration of free Glu and other free amino acids in chicken muscle and improves its taste. Here, we investigated the mechanisms by which the feeding of a low-Lys diet increases free Glu in chicken muscle. Two groups (n = 10 per group) of 28-day-old female Ross strain broiler chickens were fed diets with a graded Lys content of 90% or 100% of the recommended Lys requirement (according to National Research Council [1994] guidelines) for 10 D. Free amino acid concentrations and the mRNA abundance of protein metabolism–related genes were measured in breast muscle, and breast muscle metabolome analysis was conducted. Free Glu in muscle was increased by 51.8% in the Lys 90% group compared with the Lys 100% group (
P
< 0.01). Free threonine, glutamine, glycine, valine, isoleucine, leucine, tyrosine, phenylalanine, histidine, and 3-methyl-histidine concentrations in breast muscle were also increased in the Lys 90% group (
P
< 0.05). Metabolome analysis also showed that free amino acids were increased in the Lys 90% group. The mRNA abundance of μ-calpain, caspase-3, and 20S proteasome C2 subunit were increased in the Lys 90% group (
P
< 0.05). Moreover, the free Glu concentration in muscle was correlated with mRNA abundance of μ-calpain (
r
= 0.74,
P
< 0.01), caspase 3 (
r
= 0.69,
P
< 0.01), 20S proteasome C2 subunit (
r
= 0.65,
P
< 0.01), and cathepsin B (
r
= 0.52,
P
< 0.05). Our study suggests that the feeding of a low-Lys diet to chickens increased the free Glu content of breast muscle by promoting protein degradation.