Genetic association studies have detected two trans-acting quantitative trait loci (QTL) on chromosomes 2, 6 and one cis-acting QTL on chromosome 11 that were associated with fetal hemoglobin (HbF) levels.In these studies, HbF was expressed as a percentage of total hemoglobin or the number of erythrocytes that contain HbF (F-cells). As the g-globin chains of HbF are encoded by two non-allelic genes (HBG2, HBG1) that are expressed at different levels we used normalized gene expression and genotype data fromThe Genotype-Tissue Expression (GTEx)-project to study the effects of cis-and trans-acting HbF expression or eQTL. This allowed us to examine mRNA expression of HBG2 and HBG1individually. In addition to studying eQTL for globin genes we examined genes co-expressed with HBG1, studied upstream regulators of HBG1 co-expressed genes and performed a correlation analysis between HBG2 and HBG1 and known HbF regulators. Our results suggest differential effect of cis and trans-acting QTL on HBG and HBG1 expression. Trans-acting eQTLs have the same magnitude of effect on the expression of both HBG2 and HBG1 while the sole cis-acting eQTL affected only HBG2. Furthermore, the analysis of upstream regulators and the correlation analysis suggested that BCL2L1 might be a new potential transacting HbF activator. HbF is the major modulator of the phenotype of sickle cell anemia and b thalassemia. Depending on the effect size, modification of trans-acting elements might have a greater impact on HbF levels than cis-acting elements alone.