There is a need for models that can be used to predict the dynamics of virus depletion in hepatitis B virus (HBV)-infected individuals for use in early dose-ranging studies with nucleoside analogues that inhibit virus polymerase/ reverse transcriptase (RT), such as the triphosphate of lamivudine and the diphosphate of adefovir. To date most models of virus dynamics were developed to gain understanding of the dynamics of the virus and infected target cells, and have not incorporated the pharmacokinetic and pharmacodynamic parameters of pharmacological agents used in their treatment. Consequently, these models were not designed to predict virus depletion profiles as a function of dose regimen.Woodchuck hepatitis virus (WHV) is a member of the hepadnavirus family that includes duck hepatitis virus, ground squirrel hepatitis virus and HBV (Mason & Taylor, 1989;Roggendorf & Tolle, 1995). WHV-infected woodchucks are one of the most useful animal models for studying the pathology of HBV and for the development of antiviral nucleosides for treating HBV infections (Korba et al., 1987(Korba et al., , 2000aMason & Taylor, 1989;Seeger et al., 1991;Kajino et al., 1994;Roggendorf & Tolle, 1995;Schinazi et al., 1997Schinazi et al., ,1999Hurwitz et al., 1998;Tennant et al., 1998). Nowak et al. (1996) used a system of three differential equations that incorporated viral loads, the number of