Recombinant prion protein, rPrP, binds DNA. Both the KKRPK motif and the octapeptide repeat region of rPrP are essential for maximal binding. rPrP with pathogenic insertional mutations binds more DNA than wild-type rPrP. DNA promotes the aggregation of rPrP and protects its N terminus from proteinase K digestion. When rPrP is mixed with an expression plasmid and Ca 2؉ , the rPrP⅐DNA complex is taken up by mammalian cells leading to gene expression. In the presence of Ca 2؉ , rPrP by itself is also taken up by cells in a temperature-and pinocytosis-dependent manner. Cells do not take up rPrP ⌬KKRPK , which lacks the KKRPK motif. Thus, rPrP is the carrier for DNA and the KKRPK motif is essential for its uptake. When mixed with DNA, a pentapeptide KKRPK, but not KKKKK, is sufficient for DNA internalization and expression. In contrast, whereas the normal cellular prion protein, PrP C , on the cell surface can also internalize DNA, the imported DNA is not expressed. These findings may have relevance to the normal functions of PrP C and the pathogenic mechanisms of human prion disease.Human prion diseases constitute a group of fatal neurodegenerative diseases (1, 2). The majority of human prion diseases are sporadic, in which the pathogenic mechanisms are not known. Human prion diseases, such as Kuru and iatrogenic and variant Creutzfeld-Jacob disease, are contracted by an infectious mechanism. On the other hand, inherited human prion disease, which accounts for about 10% of human prion disease, is caused by mutation of the germline prion gene, PRNP.More than 30 different pathogenic mutations in the human PRNP gene have been identified (3). These mutations are either insertional or point mutations. Insertion mutation occurs solely in the octapeptide repeat region; wild-type human (PrP C ) 2 has five octapeptide repeats. Point mutations occur along the entire PrP C molecule. It is thought that the mutant prion protein, PrP M , is inherently unstable, leading to self-association to produce an oligomeric structure (4, 5). This structure acts as a "seed" recruiting additional PrP M , eventually leading to the formation of PrP Sc . Accumulated evidence suggests that the conversion process may require the participation of other macromolecules, such as glycosaminoglycans (6 -8), nucleic acids (9, 10), lipids (11, 12), cellular proteins, such as chaperone proteins (13,14), or divalent cations (15, 16). The mechanism by which a PrP M causes neuropathology remains unclear. PrP M may cause disease because of a gain of toxic function, loss of normal function, or both.Bacteria-produced recombinant prion proteins, rPrPs, have been used extensively as model systems to study the differences between wild-type rPrP and rPrP M (17-19). Biophysical studies suggest that thermoinstability is not the major contributing factor in the conversion process (20,21). Recently, we reported that rPrP M s with pathogenic mutations have a more exposed N terminus and bind more glycosaminoglycan (GAG) (22, 23). Binding of GAG also promotes the aggregati...