The circadian clock in the mammalian hypothalamic suprachiasmatic nucleus (SCN) is entrained by the ambient light/dark cycle, which differentially acts to cause the clock to advance or delay. Light-induced changes in the rhythmic expression of SCN clock genes are believed to be a critical step in this process, but how the two entrainment modalities-advances vs. delays-engage the molecular clockwork remains incompletely understood. We investigated molecular substrates of photic entrainment of the clock in the SCN by stably entraining hamsters to T cycles (non-24-h light/ dark cycles) consisting of a single 1-h light pulse repeated as either a short (23.33-h) or a long (24.67-h) cycle; under these conditions, the light pulse of the short cycle acts as "dawn," whereas that of the long cycle acts as "dusk." Analyses of the expression of the photoinducible and rhythmic clock genes Period 1 and 2 (Per1 and Per2) in the SCN revealed fundamental differences under these two entrainment modes. Light at dawn advanced the clock, advancing the onset of the Per1 mRNA rhythm and acutely increasing mRNA transcription, whereas light at dusk delayed the clock, delaying the offset of the Per2 mRNA rhythm and tonically increasing mRNA stability. The results suggest that the underlying molecular mechanisms of circadian entrainment differ with morning (advancing) or evening (delaying) light exposure, and such differences may reflect how entrainment takes place in nocturnal animals under natural conditions. circadian synchronization | circadian clock resetting | light entrainment A fundamental feature of the circadian clock that regulates daily behavioral and physiological rhythmicity is its entrainment to the environmental cycle of light and darkness. By matching the clock's endogenous ("free-running") period to that of the ambient day/night cycle, entrainment ensures that the phase relationship between clock and external day remains stable over time, thereby synchronizing body rhythms to local time. Light is the clock's preeminent entraining cue (Zeitgeber), and the clock responds to light by changing its angular velocity and shifting its phase. To match its oscillation to that of the Zeitgeber, the clock can increase its velocity and advance its phase if the clock's freerunning period is too long, or it can decrease its velocity and delay its phase if its free-running period is too short (1, 2).In mammals, the master circadian clock is located in the suprachiasmatic nucleus (SCN) in the anterior hypothalamus (3). The SCN is composed of multiple, coupled single-cell circadian oscillators (4), and analyses of induced and spontaneous mutations, gene sequence homologies, and protein-protein interactions have identified candidate regulatory molecules and biochemical processes that are likely to constitute the basic intracellular oscillatory mechanism (5). Genes at the core of the clock function within autoregulatory feedback loops, with proteins rhythmically suppressing the transcription of their own mRNAs. When the basic helix-loop-hel...