Factor VIIIa, the protein cofactor for factor IXa, is comprised of A1, A2, and A3-C1-C2 subunits. Recently, we showed that isolated A2 subunit enhanced the k cat for factor IXa-catalyzed activation of factor X by ϳ100-fold (ϳ1 min ؊1 ), whereas isolated A1 or A3-C1-C2 subunits showed no effect on this rate (Fay, P. J., and Koshibu, K. J. (1998) J. Biol. Chem. 273, 19049 -19054). However, A1 subunit increased the A2-dependent stimulation by ϳ10-fold. The K m for factor X in the presence of A2 subunit was unaffected by A1 subunit, whereas the k cat observed in the presence of saturating A1 and A2 subunits (ϳ15 min ؊1 ) represented 5-10% of the value observed for native factor VIIIa (ϳ200 min ؊1 ). An anti-A1 subunit antibody that blocks the association of A2 eliminated the A1-dependent contribution to factor IXa activity. Inclusion of both A1 and A2 subunits resulted in greater increases in the fluorescence anisotropy of fluorescein-Phe-Phe-Arg factor IXa than that observed for A2 subunit alone and approached values obtained with factor VIIIa. These results indicate that A1 subunit alters the A2 subunit-dependent modulation of the active site of factor IXa to synergistically increase cofactor activity, yielding an overall increase in k cat of over 1000-fold compared with factor IXa alone.The proteolytically activated form of factor VIII, factor VIIIa, serves as a cofactor for the serine protease factor IXa in the conversion of factor X to factor Xa. This complex of enzyme and cofactor, assembled on an anionic phospholipid surface, is referred to as the intrinsic factor Xase. The role of factor VIIIa is to increase the catalytic rate constant (k cat ) by several orders of magnitude. The phospholipid surface is primarily involved in reducing molecular interactions to a two-dimensional space, thereby markedly decreasing the K m for factor X. The association of factor VIIIa and factor IXa and the mechanism(s) by which factor VIIIa stimulates reaction rate are not fully understood. The importance of this interaction is indicated by defects or deficiency in factor VIII that result in hemophilia A.Factor VIII circulates as a heavy chain (A1-A2-B domains) and a light chain (A3-C1-C2 domains) associated in a divalent metal ion-dependent heterodimer. Proteolysis by thrombin yields factor VIIIa, a trimer of A1, A2, and A3-C1-C2 subunits 1 (1, 2). The A1 and A3-C1-C2 subunits retain the divalent metal ion-dependent linkage and can be isolated as a stable dimer. Conversely, the A2 subunit is associated with the A1/A3-C1-C2 dimer in a primarily electrostatic interaction and readily dissociates from the dimer at physiological pH and ionic strength. However under appropriate reaction conditions, factor VIIIa can be reconstituted from isolated A1/A3-C1-C2 dimer and A2 subunit (2-4). The affinity of A2 subunit for the A1/A3-C1-C2 has been measured following functional assay (4, 5) as well as physical assay employing surface plasmon resonance (6). In human factor VIIIa, the affinity of A2 subunit for the A1/A3-C1-C2 dimer (K d ϳ260 ...