The recombination energies resulting from electron capture by a positive ion can be accurately measured using hydrated ion nanocalorimetry in which the internal energy deposition is obtained from the number of water molecules lost from the reduced cluster. The width of the product ion distribution in these experiments is predominantly attributable to the distribution of energy that partitions into the translational and rotational modes of the water molecules that are lost. These results are consistent with a singular value for the recombination energy. For large clusters, the width of the energy distribution is consistent with rapid energy partitioning into internal vibrational modes. For some smaller clusters with high recombination energies, the measured product ion distribution is narrower than that calculated with a statistical model. These results indicate that initial water molecule loss occurs on the time scale of, or faster than energy randomization. This could be due to inherently slow internal conversion or it could be due to a multi-step process, such as initial ion-electron pair formation followed by reduction of the ion in the cluster. These results provide additional evidence for the accuracy with which condensed phase thermochemical values can be deduced from gaseous nanocalorimetry experiments. (J Am Soc Mass Spectrom 2010, 21, 615-625) © 2010 American Society for Mass Spectrometry C apture of a low-energy electron by a multiply charged peptide or protein can result in extensive and relatively non-selective fragmentation of the amide backbone, from which information about the amino acid sequence [1-3], post-translational modification sites [3][4][5], and higher-order structure [2,6,7] can be obtained. Similar fragmentation can be obtained by transferring an electron to the peptide or protein cation from a molecular anion [8] or from atoms [9,10]. These methods are being applied to both "bottom up" and "top-down" approaches to protein analysis.An important parameter in understanding how activated ions fragment is the extent of internal energy that is deposited in the activation step. For electron capture dissociation (ECD) [1-6], the recombination energy (RE) resulting from capture of an electron from a multiply charged peptide or protein has been estimated to be between 4 and 7 eV [1,11,12], based in part on known or estimated thermochemical data. Dissociation may occur from excited electronic states or from ground states [13,14], so that the internal energy deposited into an ion may not be a singular value.Some ions have been used as chemical thermometers to measure internal energy deposition [15][16][17][18]. For example, dissociation of the molecular ion of n-butylbenzene results in formation of product ions at m/z 91 and 92, the ratio of which provides information about the average internal energy of the activated precursor [15,16]. Ions that dissociate via sequential fragmentation and that have known threshold dissociation energies and similar dissociation entropies have also been used [18 -...