Objective: This study aimed to compare effects of increasing the interphase gap (IPG) on the neural response of the electrically-stimulated cochlear nerve (CN) between children with cochlear nerve deficiency (CND) and children with normal-sized CNs. Design: Study participants included 30 children with CND and 30 children with normal-sized CNs. All subjects were implanted with a Cochlear™ Nucleus® device with the internal electrode array 24RE[CA] in the test ear. The stimulus was a charge-balanced, cathodic leading, biphasic pulse with a pulse-phase duration of 50 μs. For each subject, the eCAP input/output (I/O) function was measured for six IPGs (i.e., 7, 14, 21, 28, 35 and 42 μs) at three electrode locations across the electrode array. For each subject and each testing electrode, the highest stimulation used to measure the eCAP I/O function was the maximum comfortable level measured with an IPG of 42 μs. Dependent variables (DVs) were the maximum eCAP amplitude, the eCAP threshold and the slope of the eCAP I/O function estimated using both linear and sigmoidal regression functions. For each DV, the size of the IPG effect was defined as the proportional change relative to the result measured for the 7 μs IPG at the basal electrode location. Generalized Linear Mixed effect Models with subject group, electrode location and IPG duration as the fixed effects and subject as the random effect were used to compare these DVs and the size of the IPG effect on these DVs.