Background:
The Malayan blue coral snake,
Calliophis bivirgata
flaviceps
, is a medically important venomous snake in Southeast
Asia. However, the complexity and diversity of its venom genes remain little
explored.
Methods:
To address this, we applied high-throughput next-generation sequencing to
profile the venom gland cDNA libraries of
C. bivirgata
flaviceps
. The transcriptome was
de novo
assembled, followed by gene annotation, multiple sequence alignment and
analyses of the transcripts.
Results:
A total of 74 non-redundant toxin-encoding genes from 16 protein families
were identified, with 31 full-length toxin transcripts. Three-finger toxins
(3FTx), primarily delta-neurotoxins and cardiotoxin-like/cytotoxin-like
proteins, were the most diverse and abundantly expressed. The major 3FTx
(Cb_FTX01 and Cb_FTX02) are highly similar to calliotoxin, a
delta-neurotoxin previously reported in the venom of
C.
bivirgata
. This study also revealed a conserved tyrosine
residue at position 4 of the cardiotoxin-like/cytotoxin-like protein genes
in the species. These variants, proposed as Y-type CTX-like proteins, are
similar to the H-type CTX from cobras. The substitution is conservative
though, preserving a less toxic form of elapid CTX-like protein, as
indicated by the lack of venom cytotoxicity in previous laboratory and
clinical findings. The ecological role of these toxins, however, remains
unclear. The study also uncovered unique transcripts that belong to
phospholipase A
2
of Groups IA and IB, and snake venom
metalloproteinases of PIII subclass, which show sequence variations from
those of Asiatic elapids.
Conclusion:
The venom gland transcriptome of
C. bivirgata flaviceps
from
Malaysia was
de novo
assembled and annotated. The diversity
and expression profile of toxin genes provide insights into the biological
and medical importance of the species.