Nonclassical fullerene is a new member of the fullerene family. In the present work, a systematic investigation on La x Sc 3−x N@C 80 (x = 0−3) covering both classical and nonclassical C 80 cages was performed utilizing density functional theory combined with statistical mechanics. At absolute zero, LaSc 2 N@Hept(6)-C s (2)-C 80 with a heptagon-containing nonclassical carbon is the second most stable isomer, whereas at the temperature range of endohedral metallofullerene (EMF) formation, due to the large vibrational frequencies, LaSc 2 N@Hept(6)-C s (2)-C 80 is the third most abundant isomer, and its mole fraction is very low, accounting for the low experimental yield of LaSc 2 N@Hept(6)-C s (2)-C 80 ; La 2 ScN@Hept(6)-C s (2)-C 80 , and La 3 N@Hept(6)-C s (2)-C 80 are the overwhelming isomers of the corresponding series, but compared with the cases of Sc 3 N@C 80 and LaSc 2 N@C 80 , La 2 ScN and La 3 N clusters suffer much larger constraints from the C 80 cages, perhaps preventing the synthesis of La 2 ScN@C 80 and La 3 N@C 80 species. Because of the large mole fractions and large electron donation and back-donation of La 2 ScN@Hept(6)-C s (2)-C 80 and La 3 N@Hept(6)-C s (2)-C 80 , it can be inferred that La 2 ScN and La 3 N clusters may be used to stabilize some other larger nonclassical fullerene cages. This work will provide useful insights into the origins of stabilization of nonclassical fullerene cages by endohedral derivation and guidelines for synthesis EMF with nonclassical cages.