We present a theoretical study of chalcogen bonded container capsules (A X + A X) where X=O, S, Se, and Te, and their encapsulation complexes with n-C 9 H 20 (n-C 9 H 20 @A X + A X). Both Se and Te encapsulation complexes have significant experimental and computed binding energies, analogous to the hydrogen bonded counterparts, while the S and O capsules and their encapsulation complexes show only weak binding energies, which are attributed to different types of bonding: chalcogen S•••N bonds for S-capsules and π-π stacking and weak hydrogen bonds for the O case. All A X + A X and C 9 H 20 @A X + A X present unusually high magnetic anisotropies in their interiors. The 1 H NMR spectra of the encapsulation complexes display the proton signals of the encapsulated n-nonane highly upfield shifted, in agreement with the available experimental data for the Se capsule. We found that different factors contribute to the observed magnetic anisotropy of the capsule's interior: for the Te capsule the most important factor is Te's large polarizability; for the O analogue the inductive effects produced by the electronegative nature of the O and N heteroatoms; and for the S and Se capsules, the polarizability of the heteroatoms combines with electric field effects.