2017
DOI: 10.1038/s41598-017-03213-x
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Elongation factor Tu on Escherichia coli isolated from urine of kidney stone patients promotes calcium oxalate crystal growth and aggregation

Abstract: Escherichia coli is the most common bacterium isolated from urine and stone matrix of calcium oxalate (CaOx) stone formers. Whether it has pathogenic role(s) in kidney stone formation or is only entrapped inside the stone remains unclear. We thus evaluated differences between E. coli isolated from urine of patients with kidney stone (EUK) and that from patients with urinary tract infection (UTI) without stone (EUU). From 100 stone formers and 200 UTI patients, only four pairs of EUK/EUU isolates had identical … Show more

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Cited by 56 publications
(38 citation statements)
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“…In‐gel tryptic digestion was performed as previously described . Separation of the digested peptides was performed using 1260 Infinity II nanoHPLC (Agilent Technologies, Santa Clara, CA).…”
Section: Methodsmentioning
confidence: 99%
“…In‐gel tryptic digestion was performed as previously described . Separation of the digested peptides was performed using 1260 Infinity II nanoHPLC (Agilent Technologies, Santa Clara, CA).…”
Section: Methodsmentioning
confidence: 99%
“…At (pC 0 , pC CO2 , pC b ) = (2, 4, 2), the process is more complicated and consists on three stages (Figure 2). The pr4 precipitates pr1 + 2OH -1 = pr4 + NH 3 + HPO 4 -2 (15) nearly from the very start of pr1 dissolution, ppr1 = 3.000102 in Figure (2a Figure (2c).…”
Section: The Struvite Dissolution -Graphical Presentationmentioning
confidence: 95%
“…All them were formulated on the basis of the related speciation plots (Figure 2b) and confronted with the related plot in Figure (2c). Particularly, OH -1 ions participate the reactions (15) and (17) as substrates and then pH of the solution decreases during the dissolution process on the stages 1 and 3 (see Figure 2c). On the stage 2 we have pH ≌ constant (see Eq.…”
Section: The Struvite Dissolution -Graphical Presentationmentioning
confidence: 99%
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“…For MS/MS experiment, fragmented peptides from 150 to 3,000 m/z range were scanned with XtremeScan mode (speed = 52,000 m/z/sec), ICC target = 200,000, maximal accumulation time = 100 ms. Mass spectra were deconvoluted via DataAnalysis version 4.0 SP5 (BrukerDaltonics) to.mgf file. Mascot software version 2.4.0 (Matrix Science; London, UK) was used to search MS/MS spectra against NCBI database of mammalian with the following standard Mascot parameters for CID: Enzyme = trypsin, maximal number of missed cleavages = 1, peptide tolerance = ±1.2 Da, MS/MS tolerance = ±0.6 Da, fixed modification = carbamidomethyl (C), variable modification = oxidation (M), charge states = 2+ and 3+, and instrument type = ESI-Trap 59,60 .…”
Section: Identification Of Proteins By Nanolc-esi-etd Ms/ms (Nanoscalmentioning
confidence: 99%