Global biodiversity continues to decline rapidly, and addressing this situation requires an understanding of both the problems and the solutions. This understanding is urgently required for animals occupying wetlands, among the most threatened of all habitats globally. In this thesis I focus on the ecology and conservation of shorebirds, a group comprising many threatened and declining species dependent on wetlands throughout much of their annual cycle. I focus on threats operating within Australia, where wetland loss and degradation continues due to human activity. Non-migratory shorebird species that travel widely across Australia's inland wetlands have been reported as declining in eastern Australia, but a national assessment is lacking. Migratory shorebird species that visit Australia from breeding grounds overseas appear to be declining most due to factors beyond Australia's borders, but it is not clear if threats located in Australia are exacerbating these declines. I make the most of the rich data available on shorebirds in Australia to address these knowledge gaps, in the hopes of better targeting shorebird conservation actions in Australia.In chapter one I introduce the importance of conserving migratory and highly mobile species.I then review how pulses in resource availability such as those exemplified by Australia's ephemeral wetlands impact wildlife populations. I also provide an overview of shorebird conservation in Australia. These introductions provide the theoretical underpinning for the work presented later, and highlight the challenges inherent in understanding where and when highly mobile species such as shorebirds have been impacted.In chapter two I show the benefits of applying a consistent approach to setting boundaries around areas used by migratory shorebirds during the non-breeding season. One of the first steps in identifying where conservation actions are needed for highly mobile species is defining the boundaries of management units where actions can be targeted, and which define the optimal scale for monitoring. I achieved this step by using expert knowledge to define the extent of area being used by the same local population of non-breeding shorebirds. These improved boundaries were at times very different to boundaries identified originally.In chapter three I analyse available Australian shorebird count data from many areas to determine if spatial variation in shorebird trends relates to local threats. I confirm Australia wide declines in a number of shorebird species, and add a few more to the list of shorebird species showing continental scale declines. I further show that declines are often greater in the south, but find substantial interspecific variation in trends with both latitude and 3 longitude. This suggests large scale patterns in the declines are not explained by local factors.For resident shorebirds I find rates of decline greater at non-tidal wetlands threatened by inappropriate water levels, while local threats do not appear to explain rates of decline in mi...