The heart contains six different types of endothelial cells, each with a unique function. We sought to characterize the endocardial endothelial cells (EECs), which line the chambers of the heart. EECs are relatively understudied, yet their dysregulation can lead to various cardiac pathologies. Due to the limited availability of this cell line, we developed a protocol for isolating EECs from porcine hearts and then compared their phenotype and fundamental behavior to a well-known comparator endothelial cell line, human umbilical vein endothelial cells (HUVECs). Compared with HUVECs, the EECs were slightly smaller, and stained positively for classic endothelial phenotypic markers such as CD31, von Willebrand Factor, and VE cadherin. The EECs proliferated more quickly than HUVECs, yet migrated more slowly to cover a scratch wound assay. Finally, the EECs maintained their robust endothelial phenotype (expression of CD31) through more than a dozen passages. In contrast, the HUVECs showed significantly reduced CD31 expression in later passages. These important phenotypic differences between EECs and HUVECs highlights the need for researchers to characterize specific cell lines when investigating their relevance to diseases of interest.