Lysosomes can trigger the mitochondrial apoptotic pathway by releasing proteases. Here we report that a 25-kDa protein purified from rat liver lysosomes possesses a long standing potent Bid cleavage activity at neutral pH, and the truncated Bid can in turn induce rapid mitochondrial release of cytochrome c. This protease was revealed as chymotrypsin B by biochemical and mass spectrometric analysis. Although it was long recognized as a digestive protease exclusively secreted by the exocrine pancreas, our data support that it also expresses and intracellularly resides in rat liver lysosomes. Translocation of lysosomal chymotrypsin B into cytosol was triggered by apoptotic stimuli such as tumor necrosis factor-␣, and intracellular delivery of chymotrypsin B protein induced apoptotic cell death with a potency comparable with cathepsin B, suggestive of a lysosomal-mitochondrial pathway to apoptosis regulated by chymotrypsin B following its release. Noteworthily, either knockdown of chymotrypsin B expression by RNA interference or pretreatment with chymotrypsin B inhibitor N-p-tosyl-L-phenylalanine chloromethyl ketone significantly reduced tumor necrosis factor-␣-induce apoptosis. These results demonstrate for the first time that chymotrypsin B is not only restricted to the pancreas but can function intracellularly as a pro-apoptotic protease.Apoptosis is an evolutionarily conserved process critical in various biological events, such as embryonic development, maintenance of tissue homeostasis, and removal of damaged cells. Mitochondria are viewed as one of the most pivotal sensors and amplifiers in an apoptotic process by releasing apoptogenic proteins such as cytochrome c, Second mitochondria-derived activator of caspase/direct inhibitor of apoptosis-binding protein with low pI, and endonuclease G following mitochondrial membrane permeabilization (MMP) 3 (1). MMP is mainly mediated by Bcl-2 protein family members (2). Bid (BH3 interacting domain death agonist) is an abundant proapoptotic member of the Bcl-2 family, which following activation through proteolytic cleavage is involved in various pathways of apoptosis that interplay the activation of caspases with mitochondrial dysfunction (3, 4).Recently accumulating evidence has indicated that, in addition to mitochondria, lysosomes also play important roles in the apoptosis (5). As reported, several lysosomal acid-dependent proteases, known as cathepsins, have been implicated in apoptosis induction following their relocalization to the cytosol as a result of moderate lysosomal rupture, probably via activation of the mitochondrial apoptotic pathway (6 -8). Interestingly, proteolytic activation of Bid may present a mechanism through which extralysosomal cathepsins can elicit MMP and subsequent caspase activation. Many isoforms of cathepsins (cathepsins B, H, L, S, K, X, C, and D) have been identified to be Bid-cleaving proteases. Incubation of full-length Bid with cathepsins B, H, L, and S, respectively, resulted in Bid activation and subsequent rapid cytochrome c relea...