The pathogenesis of Parkinson’s
disease (PD) is closely
linked to the massive presence of Lewy vesicles and Lewy axons in
the cytoplasm of neurons, mainly consisting of α-synuclein (αS).
Norepinephrine (NE), whose secretion can be increased by exercise,
has been demonstrated to prevent the fibrillation of αS and
to break down the mature αS fibrils. In this work, we focus
on the influence of protonation on the inhibitory ability of NE by
using amyloid core fragment αS71–82 as a
template. All-atom replica-exchange molecular dynamics simulations
(accumulating to 33.6 μs) in explicit water were performed to
explore the inhibitory effect of protonated and nonprotonated NE on
αS oligomerization. Our results show that NE/NE+ can
lead to a significant decrease in β-sheet content with increasing
temperature, while isolated αS maintains relatively higher β-sheet
conformations until 363 K, implying that both NE and NE+ can lower the critical temperature required for αS fibril
decomposition. NE and NE+ also lead to the formation of
less compact αS oligomers by preventing the backbone hydrogen
bonds and the side-chain packing. The protonation would affect the
binding affinity, interaction modes, and binding intensity of NE with
αS. Interesting, NE and NE+ have a distinct binding
free energy in the electrostatic and solvation terms, which mostly
counter each other and produce a weak binding intensity with αS.
Our work contributes to a better understanding of the inhibitory mechanism
of NE and NE+ on αS oligomerization relevant to PD
pathogenesis, which may provide clues for the design of antiamyloid
medicine.