Serotonin transporter (SERT) is responsible for reuptake and recycling of 5-hydroxytryptamine (5-HT; serotonin) after its exocytotic release during neurotransmission. Mutations in human SERT are associated with psychiatric disorders and autism. Some of these mutations affect the regulation of SERT activity by cGMPdependent phosphorylation. Here we provide direct evidence that this phosphorylation occurs at Thr276, predicted to lie near the cytoplasmic end of transmembrane helix 5 (TM5). Using membranes from HeLa cells expressing SERT and intact rat basophilic leukemia cells, we show that agents such as Na + and cocaine that stabilize outward-open conformations of SERT decreased phosphorylation and agents that stabilize inward-open conformations (e.g., 5-HT, ibogaine) increased phosphorylation. The opposing effects of the inhibitors cocaine and ibogaine were each reversed by an excess of the other inhibitor. Inhibition of phosphorylation by Na + and stimulation by ibogaine occurred at concentrations that induced outward opening and inward opening, respectively, as measured by the accessibility of cysteine residues in the extracellular and cytoplasmic permeation pathways, respectively. The results are consistent with a mechanism of SERT regulation that is activated by the transport of 5-HT, which increases the level of inward-open SERT and may lead to unwinding of the TM5 helix to allow phosphorylation.(1) reported a rare missense mutation in the coding region of serotonin transporter (SERT) in two unrelated families. Within these families, individuals with the mutation (Ile425Val, or I425V) were more strongly affected with several psychiatric disorders, including obsessive-compulsive disorder and autism spectrum disorders. Subsequently, additional families with this mutation and others in SERT have been identified (2-8).In transfected cells, the I425V mutation led to enhanced 5-HT transport relative to WT SERT (5, 9). The enhanced transport was similar to the up-regulation of 5-HT transport that had been observed in rat basophilic leukemia (RBL-2H3) cells on stimulation of adenosine A3 receptors with subsequent NO formation and cGMP production (10). Results with heterologously expressed SERT suggest that the I425V mutation interferes with this pathway either by directly increasing basal SERT phosphorylation or by inhibiting SERT dephosphorylation (11).Mutation of serine and threonine residues on the cytoplasmic surface of SERT led to the identification of Thr276 as a potential cGMP-dependent phosphorylation site (12). From homology models based on prokaryotic and eukaryotic homologs, this residue is located near the cytoplasmic end of transmembrane helix 5 (TM5), a location that agrees with cysteine scanning accessibility studies (13) that also have shown this position to be poorly accessible to aqueous reagents. The unlikely location of a phosphorylation site in a transmembrane helix, and the inaccessibility of this position, cast some doubt on the proposal that Thr276 is the site of cGMP-stimulated phosphorylat...