Altered peptide ligands with increased affinity of the peptide-MHC complex for the TCR provide an alternative strategy to natural T-cell epitopes for cancer immunotherapy, as they can recruit and stimulate stronger T-cell repertoires. However, it remains unclear how alterations of the TCR contact residues improve the interaction between the peptide-MHC complex and the TCR molecule. In this study, we introduced a molecular simulation strategy to optimize a tumor immunodominant epitope NY-ESO-1 157-165 by the substitution of the potential TCR contact residues. We correlated molecule simulation with T-cell activation capacity assay and detected the effect of modifications of TCR contact residues on T-cell recognition. An agonist peptide W5F with substitution at Trp5 with Phe was identified and it exhibits a stronger ability to induce a cross-reactive CTL response with the WT peptide. Additionally, the W5F-induced CTL could be maintained with the WT peptide and possess higher capacity in lysing native NY-ESO-1-expressing tumor cells. These results provide important insights into the enhanced immunogenicity of epitopes through substitution at the TCR contact sites and revealed a novel molecular simulation approach for rational therapeutic peptide vaccine design.Key words: Cancer immunotherapy . Epitope . Molecular simulation . TCR contact residue
IntroductionInduction of antigen-specific CTL by therapeutic peptide vaccination is a promising approach for cancer immunotherapy [1]. The specific cellular immune response starts from recognition by TCR of an immunogenic epitope presented in the context of the class I MHC molecules. Thus, modulation of CTL response by manipulating T-cell epitopes is a particularly attractive approach for cancer immunotherapy, because peptides from cancer cells are usually poorly immunogenic and often induce immune-tolerance [2,3]. Vaccination with altered peptide ligands (APL), which can be generated by appropriate amino acid substitutions at certain T-cell epitopes, has become an attractive strategy to enhance specic T-cell responses to tumors. This strategy can be achieved by two general approaches: (i) by increasing the affinity between the epitope and the MHC through substitution in the MHC anchor residues or (ii) by enhancing the interactions between the TCR and peptide-MHC (pMHC) complex through alteration at the TCR contact residues [4,5].Although APL with altered MHC contact residues can efficiently activate tumor-specific T cells in vitro, vaccination with this kind of APL has generally failed to elicit an effective anti-tumor CTL response
2248that can lead to clinical tumor regression [6,7]. APL with increased pMHC complex affinity for the TCR molecule, which are designed by modifications at the TCR contact sites rather than the MHC anchor residues, have unexpected potency to induce stronger T-cell responses and may even covert cross-reactive T cells from a tolerance state [8][9][10]. According to the structure of the TCR/pMHC complex established by X-ray crystallography, recogni...